HHsearch alignment for GI: 254780217 and conserved domain: PRK10365
>PRK10365 transcriptional regulatory protein ZraR; Provisional.
Probab=96.93 E-value=0.0065 Score=43.11 Aligned_cols=155 Identities=17% Similarity=0.245 Sum_probs=78.8
Q ss_pred CHHHHCCHHHHHHHHHHHHHC-CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHH--CCCCCCCHHHHHHHC
Q ss_conf 565610929999999999982-88981663117989888999999999981779988643121--012678867999967
Q gi|254780217|r 10 YNQRLFGHEDIEKFLSQYYCS-GRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRM--CNPDPCSPFVKQMAS 86 (347)
Q Consensus 10 ~~~~i~G~~~~~~~L~~~~~~-~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~--~~~~~~~~~~~~i~~ 86 (347)
T Consensus 137 ~~~~liG~S~am~~v~~~i~~~A~s~~pVLI~GE~GTGK~~~Ar~IH~----~S~r~~~pfv~vnC~~l~~----~l~es 208 (441)
T PRK10365 137 SQFGMVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARAIHA----SSARSEKPLVTLNCAALNE----SLLES 208 (441)
T ss_pred CCCCCEECCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHH----CCCCCCCCCEEEECCCCCH----HHHHH
T ss_conf 257866689999999999999848899489989998109999999996----5787789807987898984----55589
Q ss_pred CCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHC---------
Q ss_conf 89875453001000101342123237887554431022211112103532205542400014567776630---------
Q gi|254780217|r 87 HALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEP--------- 157 (347)
Q Consensus 87 ~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEEP--------- 157 (347)
T Consensus 209 ----eLF--G---~~~g-af---tga~~~~--~g~~~~--A~gG--TLfLdeI~~l~~~~Q~kLl~~l~~~~~~~~g~~~ 269 (441)
T PRK10365 209 ----ELF--G---HEKG-AF---TGADKRR--EGRFVE--ADGG--TLFLDEIGDISPMMQVRLLRAIQEREVQRVGSNQ 269 (441)
T ss_pred ----HHC--C---CCCC-CC---CCCCCCC--CCCEEE--CCCC--EECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf ----861--7---7556-87---8965346--898778--8998--2550231529999999999877752100058873
Q ss_pred --CCCCCEEEEECCCC-------CCCHHHHCE--EEEEECCCCCH
Q ss_conf --34341676504433-------573025203--69886479998
Q gi|254780217|r 158 --PQKVLFILISHASP-------TILSTIRSR--CLSIKFNSLSE 191 (347)
Q Consensus 158 --p~~t~fiLit~~~~-------~il~TI~SR--c~~i~f~~l~~ 191 (347)
T Consensus 270 ~~~~d~RiIaat~~~l~~~v~~g~Fr~dLy~rL~~~~i~lPpLRe 314 (441)
T PRK10365 270 TISVDVRLIAATHRDLAAEVNAGRFRQDLYYRLNVVAIEVPSLRQ 314 (441)
T ss_pred EEECCCEEEECCCCCHHHHHHCCCCHHHHHHHHCCHHCCCCCCCC
T ss_conf 441363799837889999988198258999886011137826000