HHsearch alignment for GI: 254780217 and conserved domain: PRK10416
>PRK10416 cell division protein FtsY; Provisional.
Probab=95.73 E-value=0.021 Score=39.03 Aligned_cols=126 Identities=18% Similarity=0.236 Sum_probs=64.0
Q ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHH-HHHHHC-CCCCCEEEECCCCHHHCCCCCC
Q ss_conf 88981663117989888999999999981779988643121012678867-999967-8987545300100010134212
Q gi|254780217|r 31 GRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPF-VKQMAS-HALHDFLYLSYSLNPKTGKWRT 108 (347)
Q Consensus 31 ~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~-~~~i~~-~~hpd~~~i~~~~~~k~~~~~~ 108 (347)
T Consensus 292 ~~~P~VIl~vGvNG~GKTTTigKLA~~~~~~gkkVl--l--aA~DTfRaAAieQL~~w~~r~~v~vi~~~----~g~Dpa 363 (499)
T PRK10416 292 GKTPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVM--L--AAGDTFRAAAVEQLQVWGQRNNIPVIAQH----TGADSA 363 (499)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEE--E--EEECCCCHHHHHHHHHHHCCCCCEEEECC----CCCCHH
T ss_conf 999879999747878789899999999997799537--8--84066756899999998424573698368----999979
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHH---------HHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf 323788755443102221111210353220554240001---------4567776630343416765044335
Q gi|254780217|r 109 VITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAA---------NALLKSLEEPPQKVLFILISHASPT 172 (347)
Q Consensus 109 ~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~Aa---------NALLK~LEEPp~~t~fiLit~~~~~ 172 (347)
T Consensus 364 ~V~~dai----~----~a~~~~~DvviiDTAGRl~~~~~LM~EL~ki~rvi~k~~~~aP~e~lLVlDa~tGQn 428 (499)
T PRK10416 364 SVIFDAI----Q----AAKARNVDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQN 428 (499)
T ss_pred HHHHHHH----H----HHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHH
T ss_conf 9999999----9----999729998998577643260999999999999997237899974899977876778