HHsearch alignment for GI: 254780217 and conserved domain: PRK12726
>PRK12726 flagellar biosynthesis regulator FlhF; Provisional.
Probab=92.46 E-value=0.32 Score=29.53 Aligned_cols=42 Identities=21% Similarity=0.253 Sum_probs=28.8
Q ss_pred HHHHHHHHHHCCCCCE----------EEEECCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 9999999998288981----------66311798988899999999998177
Q gi|254780217|r 20 IEKFLSQYYCSGRMHH----------ALLFEGEQGIGKATLGFRYAGHVLQN 61 (347)
Q Consensus 20 ~~~~L~~~~~~~~l~h----------a~Lf~Gp~GiGK~~~A~~~A~~llc~ 61 (347)
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~l~~g~VIaLVGvnGvGKTTTiAKLA~~l~~~ 233 (407)
T PRK12726 182 DITDWFVPYLSGKLAVEDSFDLSNHRIISLIGQTGVGKTTTLVKLGWQLLKQ 233 (407)
T ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 4068999975389770320230369089998999897899999999999977