HHsearch alignment for GI: 254780217 and conserved domain: PRK13946

>PRK13946 shikimate kinase; Provisional.
Probab=92.38  E-value=0.22  Score=30.75  Aligned_cols=34  Identities=24%  Similarity=0.283  Sum_probs=26.8

Q ss_pred             HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf             99999998288981663117989888999999999981
Q gi|254780217|r   22 KFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVL   59 (347)
Q Consensus        22 ~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~ll   59 (347)
T Consensus        12 ~~~~~~l~kkn----IvLIG~mGsGKStvGk~LA~~L~   45 (195)
T PRK13946         12 EQIRAALGKRT----VVLVGLMGAGKSTVGRRLATMLG   45 (195)
T ss_pred             HHHHHHHCCCC----EEEECCCCCCHHHHHHHHHHHHC
T ss_conf             99999858995----89989999988999999999979