HHsearch alignment for GI: 254780217 and conserved domain: PTZ00111
>PTZ00111 DNA replication licensing factor MCM4; Provisional.
Probab=93.31 E-value=0.11 Score=33.22 Aligned_cols=137 Identities=17% Similarity=0.092 Sum_probs=75.7
Q ss_pred HHHCCHHHHHHHHHHHHHC--------CCC-------------CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHH
Q ss_conf 5610929999999999982--------889-------------8166311798988899999999998177998864312
Q gi|254780217|r 12 QRLFGHEDIEKFLSQYYCS--------GRM-------------HHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVR 70 (347)
Q Consensus 12 ~~i~G~~~~~~~L~~~~~~--------~~l-------------~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~ 70 (347)
T Consensus 451 PSI~~~~dvKkgillqLFGg~~k~~~~~~~~~~~~~~~~~RgdIn-iLl~GDPgtaKSQlL~yv~~-ia---PRgvytsG 525 (916)
T PTZ00111 451 PSIKARNNVKIGLLCQLFSCNANSSDNNKSPDACYKVDNFRGIIN-VLLCGDPGTAKSQLLHYTHL-LS---PRSIYTSG 525 (916)
T ss_pred CHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEE-EEEECCCCCCHHHHHHHHHH-HC---CCEEEECC
T ss_conf 621152269999999984887545677877654444444345405-99957996018999999997-28---74267459
Q ss_pred HCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHH--HHH-HHHHCCCCCCCCCCHHHHHHHHHHCCHHHH
Q ss_conf 10126788679999678987545300100010134212323788--755-443102221111210353220554240001
Q gi|254780217|r 71 MCNPDPCSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDE--IRR-IRYFLSLTANTGYWRVIMIDPVDGMNRNAA 147 (347)
Q Consensus 71 ~~~~~~~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~--IR~-l~~~~~~~~~~~~~Ki~IId~ad~ln~~Aa 147 (347)
T Consensus 526 kgsS--------------avGLTA--------------~v~~~d~~tg~~~LEaGAL--VLaD~GvccIDEFDKM~~~~r 575 (916)
T PTZ00111 526 KSSS--------------SVGLTA--------------SIKFNESDNGRAMIQPGAV--VLANGGVCCIDELDKCHNESR 575 (916)
T ss_pred CCCC--------------CCCCEE--------------EEEECCCCCCCEEEECCCE--EECCCCEEEEEHHHCCCHHHH
T ss_conf 8654--------------226468--------------9983268878689854808--972798799622203685678
Q ss_pred HHHHHHHHHCCCCCCEE---------------EEECC--------------CCCCCHHHHCEEEEEEC
Q ss_conf 45677766303434167---------------65044--------------33573025203698864
Q gi|254780217|r 148 NALLKSLEEPPQKVLFI---------------LISHA--------------SPTILSTIRSRCLSIKF 186 (347)
Q Consensus 148 NALLK~LEEPp~~t~fi---------------Lit~~--------------~~~il~TI~SRc~~i~f 186 (347)
T Consensus 576 s~lhEaMEQ---QtvSIAKAGI~~tLnARtSvLAaANP~~gry~~~~~v~enI~lpp~LLSRFDLIfl 640 (916)
T PTZ00111 576 LSLYEVMEQ---QTVTIAKAGIVATLKAETAILASCNPINSRYNKNKAVIENINISPSLFTRFDLIYL 640 (916)
T ss_pred HHHHHHHHH---HHHHHHHCCEEEEECHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHEEEE
T ss_conf 899998866---31235323504541203456553286556578786767645799403312204677