HHsearch alignment for GI: 254780217 and conserved domain: PTZ00112
>PTZ00112 origin recognition complex 1 protein; Provisional.
Probab=98.38 E-value=0.00061 Score=51.39 Aligned_cols=191 Identities=15% Similarity=0.192 Sum_probs=121.7
Q ss_pred HHHCCHHHHHHHHHHHHHCC----CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCC
Q ss_conf 56109299999999999828----89816631179898889999999999817799886431210126788679999678
Q gi|254780217|r 12 QRLFGHEDIEKFLSQYYCSG----RMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASH 87 (347)
Q Consensus 12 ~~i~G~~~~~~~L~~~~~~~----~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~ 87 (347)
T Consensus 267 e~lpcRe~E~~~I~~Fie~~i~q~GtG~cLYISGVPGTGKTATV~eVIr~L~----------------------~~~~~~ 324 (650)
T PTZ00112 267 EYILGREKEAKEIRTFLETGIKQGGTGQILYISGVPGTGKTATVYMVIKELQ----------------------NKKLKG 324 (650)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH----------------------HHHHCC
T ss_conf 4477707899999999986411688665699978999980036999999999----------------------999708
Q ss_pred CCCCEEEECCCCH--------------HHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 9875453001000--------------10134212323788755443102221111210353220554240001456777
Q gi|254780217|r 88 ALHDFLYLSYSLN--------------PKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKS 153 (347)
Q Consensus 88 ~hpd~~~i~~~~~--------------~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~ 153 (347)
T Consensus 325 ~lp~F~fVEINGMkLt~P~qaY~~L~e~Ltg~-k~~~~~~A~~lL~k~F~~---~r~p~VlLvDELD~LvTkkQ~VlYNL 400 (650)
T PTZ00112 325 QLPWFNLFEINGVNLVHPNAAYRVFYKKLFNK-KPPNALNSYKELDKLFNN---NRTPSILIVDEADYIVTKTQKVLFTL 400 (650)
T ss_pred CCCCCEEEEECCEECCCHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHCC---CCCCEEEEECHHHHHHHCCCCEEEEC
T ss_conf 99981599973637798788999999998489-888678999999998268---99718999715777763677457773
Q ss_pred HHHCC-CCCCEEEE--EC---CCCCCCHHHHCEE--EEEECCCCCHHHHHHHHHHHC---CCCCHHHHHHHHH---HCCC
Q ss_conf 66303-43416765--04---4335730252036--988647999899999999727---8889678999999---7598
Q gi|254780217|r 154 LEEPP-QKVLFILI--SH---ASPTILSTIRSRC--LSIKFNSLSENNLYKALEQLK---IMGWDSKRDFVKI---AAYG 219 (347)
Q Consensus 154 LEEPp-~~t~fiLi--t~---~~~~il~TI~SRc--~~i~f~~l~~~~~~~~L~~~~---~~~~~~~~~~~~~---~s~G 219 (347)
T Consensus 401 FdWPT~~~SkLIVIaIANTMDLPERL~~RVsSRLGltRltF~PYt~~QL~eII~sRL~~~~~f~~dAIQl~ARKVAavSG 480 (650)
T PTZ00112 401 FDWPTKKNSKLILIIISNTMDLPYKMKPSCRSRLAFGRLVFSPYKYQQIEKVIKERLENCEIIDHTALQLCARRVTNYSG 480 (650)
T ss_pred CCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 66889888707999985067860656666555228850043998999999999998626777887899999888875031
Q ss_pred CHHHHHHHH
Q ss_conf 978999881
Q gi|254780217|r 220 SVARAIKIL 228 (347)
Q Consensus 220 s~~~A~~ll 228 (347)
T Consensus 481 DARRALdIC 489 (650)
T PTZ00112 481 DMRKALQIC 489 (650)
T ss_pred HHHHHHHHH
T ss_conf 489999999