HHsearch alignment for GI: 254780217 and conserved domain: TIGR02903
>TIGR02903 spore_lon_C ATP-dependent protease, Lon family; InterPro: IPR014252 This entry shows some relation to the widely distributed ATP-dependent protease La, also called Lon or LonA (IPR004815 from INTERPRO), but is more closely related to LonB (IPR014251 from INTERPRO), a LonA paralog found only in endospore-forming bacteria. Proteins in this entry are unassigned peptidases belonging to the MEROPS peptidase family S16 (lon protease family, clan SJ). They are restricted to a subset of endospore-forming species, and probably participate in the program of endospore formation. We propose the designation LonC..
Probab=99.74 E-value=6.8e-18 Score=163.74 Aligned_cols=204 Identities=23% Similarity=0.289 Sum_probs=137.2
Q ss_pred CCCCCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH---HHHHCCCCCCCCCHHHCCCCCCCHHH
Q ss_conf 555875656109299999999999828898166311798988899999999---99817799886431210126788679
Q gi|254780217|r 5 AFDPVYNQRLFGHEDIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYA---GHVLQNPDFSKAPVRMCNPDPCSPFV 81 (347)
Q Consensus 5 ~~~p~~~~~i~G~~~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A---~~llc~~~~~~~~~~~~~~~~~~~~~ 81 (347)
T Consensus 148 lLRP~~f~EiVGQerAI~aLlaK~aSPfPQH-iiLYGPPGVGKTTaARl~LEe~K~~~~tPF~~DA~FvEVDGtTLRWDP 226 (616)
T TIGR02903 148 LLRPRAFSEIVGQERAIKALLAKLASPFPQH-IILYGPPGVGKTTAARLALEEAKKLKNTPFAEDAPFVEVDGTTLRWDP 226 (616)
T ss_pred HCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC-EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCC
T ss_conf 6287667643334689999997631888660-785573388478999998762136874476113785751576266774
Q ss_pred HH------------HHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHH
Q ss_conf 99------------967898754530010001013421232378875544310222111121035322055424000145
Q gi|254780217|r 82 KQ------------MASHALHDFLYLSYSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANA 149 (347)
Q Consensus 82 ~~------------i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNA 149 (347)
T Consensus 227 REvTNPLLGSVHDPIYQGa~RDLAE~GvP-EPk~G-----------------L-VT~AHGG--vLFIDEIGELD~lLQnK 285 (616)
T TIGR02903 227 REVTNPLLGSVHDPIYQGARRDLAETGVP-EPKLG-----------------L-VTDAHGG--VLFIDEIGELDPLLQNK 285 (616)
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHCCCCCC-CCCCC-----------------C-CCCCCCC--EEEEECHHHHHHHHHHH
T ss_conf 10147767762576556764011047879-89898-----------------7-1004775--67650211222787632
Q ss_pred HHHHHHH--------------------------CCCCCCEEEE---ECCCCCCCHHHHCEEEEEECCCCCHHHHHHHHHH
Q ss_conf 6777663--------------------------0343416765---0443357302520369886479998999999997
Q gi|254780217|r 150 LLKSLEE--------------------------PPQKVLFILI---SHASPTILSTIRSRCLSIKFNSLSENNLYKALEQ 200 (347)
Q Consensus 150 LLK~LEE--------------------------Pp~~t~fiLi---t~~~~~il~TI~SRc~~i~f~~l~~~~~~~~L~~ 200 (347)
T Consensus 286 LLKVLEDKrV~F~SsYYDpdD~NvPkYIK~lFe~GAPADFvLIGATTr~P~eINpALRSRCaEvfFePL~p~dI~~Iv~~ 365 (616)
T TIGR02903 286 LLKVLEDKRVEFSSSYYDPDDENVPKYIKKLFEEGAPADFVLIGATTRDPEEINPALRSRCAEVFFEPLTPEDIKEIVLN 365 (616)
T ss_pred HHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCHHHCCHHHHCCCCEEECCCCCHHHHHHHHHH
T ss_conf 44432264366532124875378655888852268882568726615882440512330143132179887899999999
Q ss_pred ----HCCCCCHHHHHHHHHHCCCCHHHHHHHHCCC
Q ss_conf ----2788896789999997598978999881457
Q gi|254780217|r 201 ----LKIMGWDSKRDFVKIAAYGSVARAIKILHYD 231 (347)
Q Consensus 201 ----~~~~~~~~~~~~~~~~s~Gs~~~A~~ll~~~ 231 (347)
T Consensus 366 AA~klnv~L~~gV~e~Ia~YTi-eGRkAvnILAD~ 399 (616)
T TIGR02903 366 AAEKLNVKLAEGVEELIARYTI-EGRKAVNILADV 399 (616)
T ss_pred HHHHCCCCCCCCHHHHHHHCCC-CCHHHHHHHHHH
T ss_conf 8886177000364878721471-311222346546