HHsearch alignment for GI: 254780217 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=98.70 E-value=9.3e-07 Score=74.07 Aligned_cols=213 Identities=17% Similarity=0.181 Sum_probs=132.7
Q ss_pred CCCCCCCCCCHHHHCCHHHHHHHHHHHHH---C-CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC-HHH----
Q ss_conf 96655558756561092999999999998---2-88981663117989888999999999981779988643-121----
Q gi|254780217|r 1 MIDRAFDPVYNQRLFGHEDIEKFLSQYYC---S-GRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAP-VRM---- 71 (347)
Q Consensus 1 ~~~~~~~p~~~~~i~G~~~~~~~L~~~~~---~-~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~-~~~---- 71 (347)
T Consensus 7 ~L~~dY~P-den~i~hRdeqI~~l~~~L~~~l~PG~~P~Ni~iYGkTGtGKT~vt~~v~~~l~~~~~~~d~~D~~~~~~N 85 (383)
T TIGR02928 7 LLEPDYVP-DENRIVHRDEQIEELAKALRPILRPGSRPSNIFIYGKTGTGKTAVTKYVMKELEEAAEDRDVRDVSTVYIN 85 (383)
T ss_pred CCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
T ss_conf 37757702-74246686789999999988750674898725887888987889999999999998622699715899977
Q ss_pred CCCCC-CCHH----HHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHH-HHHHHHCC-CCCCCCCCHHHHHHHHHHCCH
Q ss_conf 01267-8867----99996789875453001000101342123237887-55443102-221111210353220554240
Q gi|254780217|r 72 CNPDP-CSPF----VKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEI-RRIRYFLS-LTANTGYWRVIMIDPVDGMNR 144 (347)
Q Consensus 72 ~~~~~-~~~~----~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~I-R~l~~~~~-~~~~~~~~Ki~IId~ad~ln~ 144 (347)
T Consensus 86 C~~~~T~y~~~~~L~~~ln-~~~~~~-----------~vP~tG~s~~~~~~~l~~~l~~~---~~~~~~ivLDEiD~Lv~ 150 (383)
T TIGR02928 86 CQILDTSYQVLVELANQLN-RRGSGE-----------EVPTTGLSTSEVFRELYKELNRE---RGDSLIIVLDEIDKLVR 150 (383)
T ss_pred CCCCCCHHHHHHHHHHHHC-CCCCCC-----------CCCCCCCCHHHHHHHHHHHHHHH---CCCEEEEEECCCCHHHC
T ss_conf 8546846999999999851-577888-----------89887787899999999998320---18879998623102215
Q ss_pred ----H-----HHHHHHHH--HHHCC-CCCCEEEEECCCC---CCCHHHHCEEE--EEECCCCCHHHHHHHHHHHC-C-CC
Q ss_conf ----0-----01456777--66303-4341676504433---57302520369--88647999899999999727-8-88
Q gi|254780217|r 145 ----N-----AANALLKS--LEEPP-QKVLFILISHASP---TILSTIRSRCL--SIKFNSLSENNLYKALEQLK-I-MG 205 (347)
Q Consensus 145 ----~-----AaNALLK~--LEEPp-~~t~fiLit~~~~---~il~TI~SRc~--~i~f~~l~~~~~~~~L~~~~-~-~~ 205 (347)
T Consensus 151 ~~~d~PAyS~~LY~L~Ra~~~~~~~~~~vgvIgISND~~f~~~Ld~RVkSsL~~eei~FpPYdA~eL~~IL~~R~v~~AF 230 (383)
T TIGR02928 151 KDDDDPAYSKLLYQLSRARENGDLENAKVGVIGISNDLKFRENLDPRVKSSLCEEEIVFPPYDAEELRDILENRAVEKAF 230 (383)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHCCCCEECCCCCCCCEECCCCHHHHHHHHHHHHHHHCC
T ss_conf 88888078788534331000357788534899986571436445753013248740040798869999999720312033
Q ss_pred -----CHHHHH---HHHHHCCCCHHHHHHHHC
Q ss_conf -----967899---999975989789998814
Q gi|254780217|r 206 -----WDSKRD---FVKIAAYGSVARAIKILH 229 (347)
Q Consensus 206 -----~~~~~~---~~~~~s~Gs~~~A~~ll~ 229 (347)
T Consensus 231 ~dGvl~d~VI~lcAA~aAq~hGDAR~AiDLLR 262 (383)
T TIGR02928 231 YDGVLDDGVIPLCAALAAQEHGDARKAIDLLR 262 (383)
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 68854622799999986206787899999999