HHsearch alignment for GI: 254780217 and conserved domain: TIGR02928

>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=98.70  E-value=9.3e-07  Score=74.07  Aligned_cols=213  Identities=17%  Similarity=0.181  Sum_probs=132.7

Q ss_pred             CCCCCCCCCCHHHHCCHHHHHHHHHHHHH---C-CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC-HHH----
Q ss_conf             96655558756561092999999999998---2-88981663117989888999999999981779988643-121----
Q gi|254780217|r    1 MIDRAFDPVYNQRLFGHEDIEKFLSQYYC---S-GRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAP-VRM----   71 (347)
Q Consensus         1 ~~~~~~~p~~~~~i~G~~~~~~~L~~~~~---~-~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~-~~~----   71 (347)
T Consensus         7 ~L~~dY~P-den~i~hRdeqI~~l~~~L~~~l~PG~~P~Ni~iYGkTGtGKT~vt~~v~~~l~~~~~~~d~~D~~~~~~N   85 (383)
T TIGR02928         7 LLEPDYVP-DENRIVHRDEQIEELAKALRPILRPGSRPSNIFIYGKTGTGKTAVTKYVMKELEEAAEDRDVRDVSTVYIN   85 (383)
T ss_pred             CCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
T ss_conf             37757702-74246686789999999988750674898725887888987889999999999998622699715899977


Q ss_pred             CCCCC-CCHH----HHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHH-HHHHHHCC-CCCCCCCCHHHHHHHHHHCCH
Q ss_conf             01267-8867----99996789875453001000101342123237887-55443102-221111210353220554240
Q gi|254780217|r   72 CNPDP-CSPF----VKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEI-RRIRYFLS-LTANTGYWRVIMIDPVDGMNR  144 (347)
Q Consensus        72 ~~~~~-~~~~----~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~I-R~l~~~~~-~~~~~~~~Ki~IId~ad~ln~  144 (347)
T Consensus        86 C~~~~T~y~~~~~L~~~ln-~~~~~~-----------~vP~tG~s~~~~~~~l~~~l~~~---~~~~~~ivLDEiD~Lv~  150 (383)
T TIGR02928        86 CQILDTSYQVLVELANQLN-RRGSGE-----------EVPTTGLSTSEVFRELYKELNRE---RGDSLIIVLDEIDKLVR  150 (383)
T ss_pred             CCCCCCHHHHHHHHHHHHC-CCCCCC-----------CCCCCCCCHHHHHHHHHHHHHHH---CCCEEEEEECCCCHHHC
T ss_conf             8546846999999999851-577888-----------89887787899999999998320---18879998623102215


Q ss_pred             ----H-----HHHHHHHH--HHHCC-CCCCEEEEECCCC---CCCHHHHCEEE--EEECCCCCHHHHHHHHHHHC-C-CC
Q ss_conf             ----0-----01456777--66303-4341676504433---57302520369--88647999899999999727-8-88
Q gi|254780217|r  145 ----N-----AANALLKS--LEEPP-QKVLFILISHASP---TILSTIRSRCL--SIKFNSLSENNLYKALEQLK-I-MG  205 (347)
Q Consensus       145 ----~-----AaNALLK~--LEEPp-~~t~fiLit~~~~---~il~TI~SRc~--~i~f~~l~~~~~~~~L~~~~-~-~~  205 (347)
T Consensus       151 ~~~d~PAyS~~LY~L~Ra~~~~~~~~~~vgvIgISND~~f~~~Ld~RVkSsL~~eei~FpPYdA~eL~~IL~~R~v~~AF  230 (383)
T TIGR02928       151 KDDDDPAYSKLLYQLSRARENGDLENAKVGVIGISNDLKFRENLDPRVKSSLCEEEIVFPPYDAEELRDILENRAVEKAF  230 (383)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHCCCCEECCCCCCCCEECCCCHHHHHHHHHHHHHHHCC
T ss_conf             88888078788534331000357788534899986571436445753013248740040798869999999720312033


Q ss_pred             -----CHHHHH---HHHHHCCCCHHHHHHHHC
Q ss_conf             -----967899---999975989789998814
Q gi|254780217|r  206 -----WDSKRD---FVKIAAYGSVARAIKILH  229 (347)
Q Consensus       206 -----~~~~~~---~~~~~s~Gs~~~A~~ll~  229 (347)
T Consensus       231 ~dGvl~d~VI~lcAA~aAq~hGDAR~AiDLLR  262 (383)
T TIGR02928       231 YDGVLDDGVIPLCAALAAQEHGDARKAIDLLR  262 (383)
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf             68854622799999986206787899999999