>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.

Probab=91.78 E-value=0.23 Score=30.72 Aligned_cols=166 Identities=17% Similarity=0.213 Sum_probs=77.4 Q ss_pred HHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCC--HHHHHHHCCC Q ss_conf 65610929999999999982889816631179898889999999999817799886431210126788--6799996789 Q gi|254780217|r 11 NQRLFGHEDIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCS--PFVKQMASHA 88 (347) Q Consensus 11 ~~~i~G~~~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~--~~~~~i~~~~ 88 (347) T Consensus 8 L~K~yg~~~al~~vsf~v~~Gei---~gllGpNGAGKTTl~~~l~Gl~~----p~~G~i~i~G~~~~~~~~~~~~~-ig~ 79 (301) T TIGR03522 8 LTKLYGTQNALDEVSFEAQKGRI---VGFLGPNGAGKSTTMKIITGYLP----PDSGSVQVCGEDVLQNPKEVQRN-IGY 79 (301) T ss_pred EEEEECCEEEECCEEEEECCCCE---EEEECCCCCCHHHHHHHHHCCCC----CCCCEEEECCEECCCCHHHHHHH-CEE T ss_conf 99999999997360678859819---99999999819999999967956----89777999275134487999853-767 Q ss_pred CCCEEEE--CCCCHH------HCCCCCCCCCHHHHHHHHHHCCCCCC----------------------CCCCHHHHHHH Q ss_conf 8754530--010001------01342123237887554431022211----------------------11210353220 Q gi|254780217|r 89 LHDFLYL--SYSLNP------KTGKWRTVITVDEIRRIRYFLSLTAN----------------------TGYWRVIMIDP 138 (347) Q Consensus 89 hpd~~~i--~~~~~~------k~~~~~~~I~vd~IR~l~~~~~~~~~----------------------~~~~Ki~IId~ 138 (347) T Consensus 80 ~pq~~~l~~~ltv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~kqrl~la~aL~~~P~lliLDE 159 (301) T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQHKKIGQLSKGYRQRVGLAQALIHDPKVLILDE 159 (301) T ss_pred ECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEEC T ss_conf 45556567888999999999997399989999999999988188566548276779988445998898707998999948 Q ss_pred HH-HCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCEEEEEE Q ss_conf 55-424000145677766303434167650443357302520369886 Q gi|254780217|r 139 VD-GMNRNAANALLKSLEEPPQKVLFILISHASPTILSTIRSRCLSIK 185 (347) Q Consensus 139 ad-~ln~~AaNALLK~LEEPp~~t~fiLit~~~~~il~TI~SRc~~i~ 185 (347) T Consensus 160 Pt~GLDp~~~~~~~~~l~~l~~~~TillssH~l~e-~e~lcdri~ii~ 206 (301) T TIGR03522 160 PTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQE-VEAICDRVIIIN 206 (301) T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHH-HHHHCCEEEEEE T ss_conf 86678989999999999987599999998785899-998699999998

HHsearch alignment for GI: 254780217 and conserved domain: TIGR03522