HHsearch alignment for GI: 254780217 and conserved domain: cd03227
>cd03227 ABC_Class2 ABC-type Class 2 contains systems involved in cellular processes other than transport. These families are characterised by the fact that the ABC subunit is made up of duplicated, fused ABC modules (ABC2). No known transmembrane proteins or domains are associated with these proteins.
Probab=94.89 E-value=0.071 Score=34.76 Aligned_cols=114 Identities=17% Similarity=0.170 Sum_probs=55.1
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCEE-EECCCCHHHCCCCCCCCCHHH
Q ss_conf 6631179898889999999999817799886431210126788679999678987545-300100010134212323788
Q gi|254780217|r 36 ALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALHDFL-YLSYSLNPKTGKWRTVITVDE 114 (347)
Q Consensus 36 a~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hpd~~-~i~~~~~~k~~~~~~~I~vd~ 114 (347)
T Consensus 23 ~~iItGpN~sGKSt~Lr~i~l~~~~a~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~lSgg------~~~ 84 (162)
T cd03227 23 LTIITGPNGSGKSTILDAIGLALGGAQSATRRRSGVKAG------------CIVAAVSAELIFTRLQLSGG------EKE 84 (162)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCC------------CCCHHHEEEEEECCCCCCCC------HHH
T ss_conf 899989987757999999999999863267752555427------------76402305766412000542------999
Q ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHCCH-----HHHHHHHHHHHHCCCCCCEEEEECCCC
Q ss_conf 755443102221111210353220554240-----001456777663034341676504433
Q gi|254780217|r 115 IRRIRYFLSLTANTGYWRVIMIDPVDGMNR-----NAANALLKSLEEPPQKVLFILISHASP 171 (347)
Q Consensus 115 IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~-----~AaNALLK~LEEPp~~t~fiLit~~~~ 171 (347)
T Consensus 85 ~~~l~~~l~~~-~~~~~~lillDE~~~Gtd~~~~~~l~~~i~~~~~~---~~~~i~tTH~~e 142 (162)
T cd03227 85 LSALALILALA-SLKPRPLYILDEIDRGLDPRDGQALAEAILEHLVK---GAQVIVITHLPE 142 (162)
T ss_pred HHHHHHHHHHC-CCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHC---CCEEEEECCHHH
T ss_conf 99999999854-24898489963655799988999999999999976---998999797399