HHsearch alignment for GI: 254780217 and conserved domain: cd03288
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=94.76 E-value=0.04 Score=36.72 Aligned_cols=52 Identities=15% Similarity=0.170 Sum_probs=35.6
Q ss_pred CCHHHHHHHHH-HCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCEEEEEEC
Q ss_conf 21035322055-4240001456777663034341676504433573025203698864
Q gi|254780217|r 130 YWRVIMIDPVD-GMNRNAANALLKSLEEPPQKVLFILISHASPTILSTIRSRCLSIKF 186 (347)
Q Consensus 130 ~~Ki~IId~ad-~ln~~AaNALLK~LEEPp~~t~fiLit~~~~~il~TI~SRc~~i~f 186 (347)
T Consensus 174 ~~~iliLDEpts~LD~~te~~i~~~l~~~~~~~TvI~ItHrl~----~~~~-~D~Iiv 226 (257)
T cd03288 174 KSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVS----TILD-ADLVLV 226 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHH----HHHH-CCEEEE
T ss_conf 9999999587667899999999999999749999999923898----9985-999999