HHsearch alignment for GI: 254780217 and conserved domain: pfam00004

>pfam00004 AAA ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes.
Probab=98.88  E-value=4.3e-09  Score=92.84  Aligned_cols=115  Identities=23%  Similarity=0.200  Sum_probs=72.3

Q ss_pred             EEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHHH
Q ss_conf             63117989888999999999981779988643121012678867999967898754530010001013421232378875
Q gi|254780217|r   37 LLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEIR  116 (347)
Q Consensus        37 ~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~IR  116 (347)
T Consensus         1 iLl~GppGtGKT~~a~~la~~~~~~-------~~~v---------------~~~~~~--~~-~~---g-----~~~~~i~   47 (131)
T pfam00004         1 LLLYGPPGTGKTTLAKAVAKELGAP-------FIEI---------------SGSELV--SK-YV---G-----ESEKRLR   47 (131)
T ss_pred             CEEECCCCCCHHHHHHHHHHHHCCC-------CEEC---------------CCCCCC--CC-CC---C-----HHHHHHH
T ss_conf             9878999999999999999997898-------5332---------------420122--23-34---5-----0688899


Q ss_pred             HHHHHCCCCCCCCCCHHHHHHHHHHCCHH-----------HHHHHHHHHHH---CCCCCCEEEEECCCCCCCHHHH-CEE
Q ss_conf             54431022211112103532205542400-----------01456777663---0343416765044335730252-036
Q gi|254780217|r  117 RIRYFLSLTANTGYWRVIMIDPVDGMNRN-----------AANALLKSLEE---PPQKVLFILISHASPTILSTIR-SRC  181 (347)
Q Consensus       117 ~l~~~~~~~~~~~~~Ki~IId~ad~ln~~-----------AaNALLK~LEE---Pp~~t~fiLit~~~~~il~TI~-SRc  181 (347)
T Consensus        48 ~~f~~a~~----~~p~Il~iDe~d~l~~~~~~~~~~~~~~~~~~ll~~ld~~~~~~~~v~~I~tTN~~~~ld~al~r~Rf  123 (131)
T pfam00004        48 ELFEAAKK----LAPCVIFIDEIDALAGSRGSGGDSESRRVVNQLLTELDGFTSSLSKVIVIAATNRPDKLDPALLRGRF  123 (131)
T ss_pred             HHHHHHHH----CCCCEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHCCHHHHCCCC
T ss_conf             99999997----49918983116777516788888751326878999985022468876999975990449977962833


Q ss_pred             EEEECCC
Q ss_conf             9886479
Q gi|254780217|r  182 LSIKFNS  188 (347)
Q Consensus       182 ~~i~f~~  188 (347)
T Consensus       124 d~~i~~p  130 (131)
T pfam00004       124 DRIIEFP  130 (131)
T ss_pred             EEEEEEC
T ss_conf             2899806