HHsearch alignment for GI: 254780217 and conserved domain: pfam00448

Probab=97.17  E-value=0.0011  Score=49.31  Aligned_cols=135  Identities=16%  Similarity=0.147  Sum_probs=70.5

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHH-HH---HCCCCCCEEEECCCCHHHCCCCCCC
Q ss_conf             8166311798988899999999998177998864312101267886799-99---6789875453001000101342123
Q gi|254780217|r   34 HHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVK-QM---ASHALHDFLYLSYSLNPKTGKWRTV  109 (347)
Q Consensus        34 ~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~-~i---~~~~hpd~~~i~~~~~~k~~~~~~~  109 (347)
T Consensus         1 P~vi~lvGptGvGKTTTiaKLAa~~~~~-~---~~V~lit~Dt~R~gA~eQL~~ya~~l~v~~~~~~~~~----------   66 (196)
T pfam00448         1 PNVILLVGLQGSGKTTTIAKLAAYLKKQ-G---KKVLLVAADTFRAAAIEQLKQLAERLGVPVFGSGTGS----------   66 (196)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHC-C---CEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCC----------
T ss_conf             9699998999998899999999999977-9---9289997587768899999999986398178148777----------


Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHH--HHHHHHHHH-CCCCCCEEEEECCCCCCCHHHHCEEEEEEC
Q ss_conf             23788755443102221111210353220554240001--456777663-034341676504433573025203698864
Q gi|254780217|r  110 ITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAA--NALLKSLEE-PPQKVLFILISHASPTILSTIRSRCLSIKF  186 (347)
Q Consensus       110 I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~Aa--NALLK~LEE-Pp~~t~fiLit~~~~~il~TI~SRc~~i~f  186 (347)
T Consensus        67 d~~~~~~~~l~~~~----~~~~D~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~f~~~~~~  142 (196)
T pfam00448        67 DPAAVAFDAVEKAK----AENYDVVLVDTAGRLQNDKNLMDELKKIKRVIAPDEVLLVLDATTGQNALNQAKAFNEAVGI  142 (196)
T ss_pred             CHHHHHHHHHHHHH----HCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf             87899999999988----46899999989998747677899999998522873028998567782137899987600477