HHsearch alignment for GI: 254780217 and conserved domain: pfam00910
>pfam00910 RNA_helicase RNA helicase. This family includes RNA helicases thought to be involved in duplex unwinding during viral RNA replication. Members of this family are found in a variety of single stranded RNA viruses.
Probab=95.14 E-value=0.018 Score=39.62 Aligned_cols=25 Identities=32% Similarity=0.456 Sum_probs=22.0
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 6311798988899999999998177
Q gi|254780217|r 37 LLFEGEQGIGKATLGFRYAGHVLQN 61 (347)
Q Consensus 37 ~Lf~Gp~GiGK~~~A~~~A~~llc~ 61 (347)
T Consensus 1 i~l~G~~G~GKS~~a~~la~~~~~~ 25 (105)
T pfam00910 1 IWLYGPPGCGKSTLAKYLARALLDH 25 (105)
T ss_pred CEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 9897999898899999999999998