HHsearch alignment for GI: 254780217 and conserved domain: pfam04851

>pfam04851 ResIII Type III restriction enzyme, res subunit.
Probab=95.51  E-value=0.22  Score=30.88  Aligned_cols=92  Identities=20%  Similarity=0.167  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCEEEEC
Q ss_conf             29999999999982889816631179898889999999999817799886431210126788679999678987545300
Q gi|254780217|r   17 HEDIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALHDFLYLS   96 (347)
Q Consensus        17 ~~~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hpd~~~i~   96 (347)
T Consensus         8 Q~~a~~~~---~~~~~----~~i~~pTGsGKT~~~~~~i~~~~~~-------------------------~~--~~lvlv   53 (103)
T pfam04851         8 QIEAIRNL---LEKKR----GLIVMATGSGKTLTAAKLIARLLKG-------------------------KK--KVLFLV   53 (103)
T ss_pred             HHHHHHHH---HHCCC----EEEEECCCCCHHHHHHHHHHHHHHC-------------------------CC--CEEEEE
T ss_conf             99999999---96398----6999589998799999999999846-------------------------99--299990


Q ss_pred             CCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             10001013421232378875544310222111121035322055424000145677766303434167650
Q gi|254780217|r   97 YSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEPPQKVLFILIS  167 (347)
Q Consensus        97 ~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEEPp~~t~fiLit  167 (347)
T Consensus        54 p----------~~~L~~Q~~~---~~----------lii~DE~H~~~a~~--~~~~l~~~~~~~~~lGlTA   99 (103)
T pfam04851        54 P----------RKDLLEQALE---EF----------VIIIDEAHHSSAKT--KYRKILEYFKPAFLLGLTA   99 (103)
T ss_pred             C----------CHHHHHHHHH---HH----------HHHHHHHHHCCCHH--HHHHHHHHCCCCEEEEEEE
T ss_conf             8----------2999999999---65----------64601635235378--9999999577260899800