HHsearch alignment for GI: 254780217 and conserved domain: pfam04851
>pfam04851 ResIII Type III restriction enzyme, res subunit.
Probab=95.51 E-value=0.22 Score=30.88 Aligned_cols=92 Identities=20% Similarity=0.167 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCEEEEC
Q ss_conf 29999999999982889816631179898889999999999817799886431210126788679999678987545300
Q gi|254780217|r 17 HEDIEKFLSQYYCSGRMHHALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALHDFLYLS 96 (347)
Q Consensus 17 ~~~~~~~L~~~~~~~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hpd~~~i~ 96 (347)
T Consensus 8 Q~~a~~~~---~~~~~----~~i~~pTGsGKT~~~~~~i~~~~~~-------------------------~~--~~lvlv 53 (103)
T pfam04851 8 QIEAIRNL---LEKKR----GLIVMATGSGKTLTAAKLIARLLKG-------------------------KK--KVLFLV 53 (103)
T ss_pred HHHHHHHH---HHCCC----EEEEECCCCCHHHHHHHHHHHHHHC-------------------------CC--CEEEEE
T ss_conf 99999999---96398----6999589998799999999999846-------------------------99--299990
Q ss_pred CCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 10001013421232378875544310222111121035322055424000145677766303434167650
Q gi|254780217|r 97 YSLNPKTGKWRTVITVDEIRRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEEPPQKVLFILIS 167 (347)
Q Consensus 97 ~~~~~k~~~~~~~I~vd~IR~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEEPp~~t~fiLit 167 (347)
T Consensus 54 p----------~~~L~~Q~~~---~~----------lii~DE~H~~~a~~--~~~~l~~~~~~~~~lGlTA 99 (103)
T pfam04851 54 P----------RKDLLEQALE---EF----------VIIIDEAHHSSAKT--KYRKILEYFKPAFLLGLTA 99 (103)
T ss_pred C----------CHHHHHHHHH---HH----------HHHHHHHHHCCCHH--HHHHHHHHCCCCEEEEEEE
T ss_conf 8----------2999999999---65----------64601635235378--9999999577260899800