HHsearch alignment for GI: 254780217 and conserved domain: pfam06309

>pfam06309 Torsin Torsin. This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterized by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of (pfam00004) proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia.
Probab=96.30  E-value=0.016  Score=39.91  Aligned_cols=51  Identities=24%  Similarity=0.354  Sum_probs=41.8

Q ss_pred             HHHHCCHHHHHHHHHHHHHC------CCCCEEEEECCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             65610929999999999982------8898166311798988899999999998177
Q gi|254780217|r   11 NQRLFGHEDIEKFLSQYYCS------GRMHHALLFEGEQGIGKATLGFRYAGHVLQN   61 (347)
Q Consensus        11 ~~~i~G~~~~~~~L~~~~~~------~~l~ha~Lf~Gp~GiGK~~~A~~~A~~llc~   61 (347)
T Consensus        24 ~~~lfGQhla~~~v~~al~~~l~~~~p~KpLVlSfHG~tGtGKn~vs~liA~~Ly~~   80 (127)
T pfam06309        24 ARRLFGQHLVKQLVVRSVKGHWENPKPRKPLVLSFHGWTGTGKNFVAEIIADNLYRD   80 (127)
T ss_pred             HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
T ss_conf             875347798999999999999748999997488701899987989999999998754