HHsearch alignment for GI: 254780217 and conserved domain: pfam07726

>pfam07726 AAA_3 ATPase family associated with various cellular activities (AAA). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.

Probab=97.93  E-value=1.8e-05  Score=63.62  Aligned_cols=88  Identities=20%  Similarity=0.236  Sum_probs=49.8

Q ss_pred             EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCHHHH
Q ss_conf             66311798988899999999998177998864312101267886799996789875453001000101342123237887
Q gi|254780217|r   36 ALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALHDFLYLSYSLNPKTGKWRTVITVDEI  115 (347)
Q Consensus        36 a~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hpd~~~i~~~~~~k~~~~~~~I~vd~I  115 (347)
T Consensus         1 hVLL~GppG~GKT~l~~~lA~~~~~~~~-----~i~~~~~~-----------~~~Dl~G~~-~~~~~~~~~---------   54 (131)
T pfam07726         1 HVLLEGVPGLAKTLLARTLARSLGLDFR-----RIQFTPDL-----------LPSDITGTE-VYDQKTREF---------   54 (131)
T ss_pred             CEEEECCCCCHHHHHHHHHHHHHCCCCE-----EEEECCCC-----------CCCCCCCCE-EECCCCCEE---------
T ss_conf             9878989987699999999999599816-----88833776-----------700036845-423787408---------


Q ss_pred             HHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf             55443102221111210353220554240001456777663
Q gi|254780217|r  116 RRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEE  156 (347)
Q Consensus       116 R~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEE  156 (347)
T Consensus        55 -----~~~~G~l~~--~vl~lDEin~a~~~v~~~Ll~~l~e   88 (131)
T pfam07726        55 -----EFRPGPIFA--NVLLADEINRAPPKTQSALLEAMQE   88 (131)
T ss_pred             -----EEECCCCCC--CCEEEEHHHCCCHHHHHHHHHHHHC
T ss_conf             -----984573103--7056401203998999999976326