HHsearch alignment for GI: 254780217 and conserved domain: pfam07728

>pfam07728 AAA_5 AAA domain (dynein-related subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.
Probab=98.13  E-value=4.8e-06  Score=68.31  Aligned_cols=90  Identities=28%  Similarity=0.389  Sum_probs=49.4

Q ss_pred             EEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCC-CEEEECCCCHHHCCCCCCCCCHHHH
Q ss_conf             631179898889999999999817799886431210126788679999678987-5453001000101342123237887
Q gi|254780217|r   37 LLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDPCSPFVKQMASHALH-DFLYLSYSLNPKTGKWRTVITVDEI  115 (347)
Q Consensus        37 ~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~~~~~~~~i~~~~hp-d~~~i~~~~~~k~~~~~~~I~vd~I  115 (347)
T Consensus         2 vll~Gp~G~GKT~la~~la~~l-~~~-----~~~~i~----------~~~~~~~~dl~G-~~~~~~~~~~~-----~~--   57 (139)
T pfam07728         2 VLLVGPPGTGKSELAERLAAAL-SNR-----PVFYVQ----------LTRDTTEEDLKG-RRNIANGTTSW-----VD--   57 (139)
T ss_pred             EEEECCCCCHHHHHHHHHHHHC-CCC-----CCHHHC----------CCCCCCHHHCCC-CEECCCCCEEE-----EC--
T ss_conf             8999899756999999999980-798-----311121----------465565222057-34237993578-----15--


Q ss_pred             HHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf             55443102221111210353220554240001456777663
Q gi|254780217|r  116 RRIRYFLSLTANTGYWRVIMIDPVDGMNRNAANALLKSLEE  156 (347)
Q Consensus       116 R~l~~~~~~~~~~~~~Ki~IId~ad~ln~~AaNALLK~LEE  156 (347)
T Consensus        58 ----g~l~~-a~~-~g~vl~lDEin~a~~~v~~~L~~~le~   92 (139)
T pfam07728        58 ----GPLVR-AAR-EGEIAVLDEINRANPDVLNSLLSLLDE   92 (139)
T ss_pred             ----CHHHC-CCC-CCCEEEECCHHHCCHHHHHHHHHHHCC
T ss_conf             ----51410-101-286899634344899999999999748