HHsearch alignment for GI: 254780217 and conserved domain: smart00487
>smart00487 DEXDc DEAD-like helicases superfamily.
Probab=96.53 E-value=0.012 Score=40.99 Aligned_cols=132 Identities=15% Similarity=0.142 Sum_probs=57.4
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC----CCHHHHHHHC-CCCC---CEEEECCCCH----HH
Q ss_conf 166311798988899999999998177998864312101267----8867999967-8987---5453001000----10
Q gi|254780217|r 35 HALLFEGEQGIGKATLGFRYAGHVLQNPDFSKAPVRMCNPDP----CSPFVKQMAS-HALH---DFLYLSYSLN----PK 102 (347)
Q Consensus 35 ha~Lf~Gp~GiGK~~~A~~~A~~llc~~~~~~~~~~~~~~~~----~~~~~~~i~~-~~hp---d~~~i~~~~~----~k 102 (347)
T Consensus 25 ~~~~i~~~tGsGKT~~~~~~~~~~~~~~~~~~--~--li~~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (201)
T smart00487 25 RDVILAAPTGSGKTLAALLPALEALKRGKGKR--V--LVLVPTRELAEQWAEELKKLGPSLGLKVVGLYGGDSKREQLRK 100 (201)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCE--E--EEEECCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHH
T ss_conf 98899899996099999999999863389975--9--9990859999999988601021020445565247737999999
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCC-CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH-CCCCCCEEEEECCC
Q ss_conf 13421232378875544310222-1111210353220554240001456777663-03434167650443
Q gi|254780217|r 103 TGKWRTVITVDEIRRIRYFLSLT-ANTGYWRVIMIDPVDGMNRNAANALLKSLEE-PPQKVLFILISHAS 170 (347)
Q Consensus 103 ~~~~~~~I~vd~IR~l~~~~~~~-~~~~~~Ki~IId~ad~ln~~AaNALLK~LEE-Pp~~t~fiLit~~~ 170 (347)
T Consensus 101 ~~~~~~~i~i~t~~~l~~~~~~~~~~~~~~~~vIiDE~H~~~~~~~~~~~~~~~~~~~~~~~~i~lSAT~ 170 (201)
T smart00487 101 LESGKTDILVTTPGRLLDLLENDLLELSNVDLVILDEAHRLLDGGFGDQLEKLLKLLPKNVQLLLLSATP 170 (201)
T ss_pred HHCCCCCEEEECHHHHHHHHHHCCCCCCCCEEEEEECHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCC
T ss_conf 9759998999558999999972754525431999989677512570999999999679999789992489