HHsearch alignment for GI: 254780218 and conserved domain: COG0541

Probab=97.71  E-value=0.00022  Score=46.48  Aligned_cols=112  Identities=24%  Similarity=0.322  Sum_probs=62.7

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC----------CCCHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf             8868998678887979999999999997798199987788984----------410011001244454101345677788
Q gi|254780218|r    3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP----------AAEAARHVLLSCGVDEFGAEAEAIVFA   72 (225)
Q Consensus         3 ~g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~----------~ge~ir~~l~~~~~~~~~~~~~~lLfa   72 (225)
T Consensus        99 ~P~vImmvGLQGsGKTTt~~KLA~~lkk~~~kvllVa--aD~~RpAA~eQL~~La~q~~v~~f~~-~~~~~Pv~------  169 (451)
T COG0541          99 PPTVILMVGLQGSGKTTTAGKLAKYLKKKGKKVLLVA--ADTYRPAAIEQLKQLAEQVGVPFFGS-GTEKDPVE------  169 (451)
T ss_pred             CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEE--CCCCCHHHHHHHHHHHHHCCCCEECC-CCCCCHHH------
T ss_conf             9858999815679748689999999997499458985--05678689999999998609853167-78899799------


Q ss_pred             HHHHHHHHHHHHHHHCC-CCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEE-EEE
Q ss_conf             99999776356554234-5258723542431000100344424577654442038898411566-520
Q gi|254780218|r   73 AARLDHVENVIRPALME-GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTII-LDL  138 (225)
Q Consensus        73 adr~~~~~~~I~p~L~~-g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~-Ldv  138 (225)
T Consensus       170 -----Iak~al~~ak~~~~DvvIvDT---------AGRl~ide~Lm~El~~I-k~~~~P~E~llVvDa  222 (451)
T COG0541         170 -----IAKAALEKAKEEGYDVVIVDT---------AGRLHIDEELMDELKEI-KEVINPDETLLVVDA  222 (451)
T ss_pred             -----HHHHHHHHHHHCCCCEEEEEC---------CCCCCCHHHHHHHHHHH-HHHCCCCEEEEEEEC
T ss_conf             -----999999999974998899968---------87330309999999999-855398748998764