HHsearch alignment for GI: 254780218 and conserved domain: COG0572
>COG0572 Udk Uridine kinase [Nucleotide transport and metabolism].
Probab=98.17 E-value=1.7e-05 Score=53.05 Aligned_cols=163 Identities=17% Similarity=0.128 Sum_probs=71.1
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 86899867888797999999999999779819998778898441001100124445410134567778899999776356
Q gi|254780218|r 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVI 83 (225)
Q Consensus 4 g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~~~I 83 (225)
T Consensus 8 ~iiIgIaG~SgSGKTTv~~~l~~~~~~~--~~~~I~~D~YYk-~~~~~~~~~~~~~n~d~p~A~D-------~dLl~~~L 77 (218)
T COG0572 8 VIIIGIAGGSGSGKTTVAKELSEQLGVE--KVVVISLDDYYK-DQSHLPFEERNKINYDHPEAFD-------LDLLIEHL 77 (218)
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHCCC--CCEEEECCCCCC-CHHHCCHHHCCCCCCCCHHHHC-------HHHHHHHH
T ss_conf 6999986798778899999999982867--524765223202-5301667553785744823436-------89999999
Q ss_pred HHHHCCCCEEEECCCCCCCEEH--HCCCCC-CCHHHHHHHHHHHCCC--CCCCEEEEEEECHHHHHHHHHHHHHHHHCCH
Q ss_conf 5542345258723542431000--100344-4245776544420388--9841156652034877644321111100000
Q gi|254780218|r 84 RPALMEGKILLCDRFLDSSYAY--QGERDS-SQHLFLDSLQEISVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 (225)
Q Consensus 84 ~p~L~~g~iVI~DRy~~S~lAY--Q~~~~~-~~~~~i~~l~~~~~~~--~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~~~~ 158 (225)
T Consensus 78 ~-~L~~g~~v~~P~yd~~~~~r~~~~i~~~p~~VIIvEGi~~l~d~~lr~~~d~kIfvdt~~D~RliRri~RD~~~rg~~ 156 (218)
T COG0572 78 K-DLKQGKPVDLPVYDYKTHTREPETIKVEPNDVVIVEGILLLYDERLRDLMDLKIFVDTDADVRLIRRIKRDVQERGRD 156 (218)
T ss_pred H-HHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf 9-997699224564203136325773313897289994230015076776606789997783278899888779881999
Q ss_pred HH-HHHHCCHHHHHHHHHHHHHHH
Q ss_conf 00-021128899999999999999
Q gi|254780218|r 159 LD-YFERKDVMIHEKRRQIFLDIA 181 (225)
Q Consensus 159 ~d-~~E~~~~~~~~kv~~~y~~la 181 (225)
T Consensus 157 ~~~vi~----qy~~~vkp~~~~fI 176 (218)
T COG0572 157 LESVIE----QYVKTVRPMYEQFI 176 (218)
T ss_pred HHHHHH----HHHHHHCHHHHHCC
T ss_conf 899999----99986174146015