HHsearch alignment for GI: 254780218 and conserved domain: KOG3354

Probab=98.30  E-value=1.4e-05  Score=53.58  Aligned_cols=163  Identities=20%  Similarity=0.225  Sum_probs=86.6

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC----CHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             899867888797999999999999779819998778898441----0011001244454101345677788999997763
Q gi|254780218|r    6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA----EAARHVLLSCGVDEFGAEAEAIVFAAARLDHVEN   81 (225)
Q Consensus         6 ~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~g----e~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~~   81 (225)
T Consensus        14 ~i~vmGvsGsGKSTigk~L~~~l~~~F~d-------gDd~Hp~~NveKM~~GipLnD~DR~-pW----------L~~i~~   75 (191)
T KOG3354          14 VIVVMGVSGSGKSTIGKALSEELGLKFID-------GDDLHPPANVEKMTQGIPLNDDDRW-PW----------LKKIAV   75 (191)
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHCCCCCC-------CCCCCCHHHHHHHHCCCCCCCCCCC-HH----------HHHHHH
T ss_conf             59998358877445999999985886245-------5557987889988369988853211-79----------999999


Q ss_pred             HHHHHHCCCCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHH---HHCCCCCCC---EEEEEEECHHHHHHHHHHHHHHHH
Q ss_conf             56554234525872354243100010034442457765444---203889841---156652034877644321111100
Q gi|254780218|r   82 VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE---ISVQEVMPD---CTIILDLPVDIGLKRVQNRYSLRE  155 (225)
Q Consensus        82 ~I~p~L~~g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~---~~~~~~~PD---l~i~Ldv~~e~a~~Ri~~R~~~~~  155 (225)
T Consensus        76 ~~~~~l~~~q~vV--------lACS----aLKk~YRdILr~sl~~gk~~~~~~~~l~fi~l~~s~evi~~Rl~~R~gHFM  143 (191)
T KOG3354          76 ELRKALASGQGVV--------LACS----ALKKKYRDILRHSLKDGKPGKCPESQLHFILLSASFEVILKRLKKRKGHFM  143 (191)
T ss_pred             HHHHHHHCCCEEE--------EEHH----HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCC
T ss_conf             9998763278189--------9728----888999999973211478667864058886330429999999840666668


Q ss_pred             CCHHHHHHHCCHHHHHHHHHHHHHHHHHCC--CCEEEECCC-CCHHHHHHHHHHHHHHH
Q ss_conf             000000211288999999999999999789--949998189-78899999999999999
Q gi|254780218|r  156 SACLDYFERKDVMIHEKRRQIFLDIARNQP--DRCHIVDSA-HSFQSVATNILNIVWEL  211 (225)
Q Consensus       156 ~~~~d~~E~~~~~~~~kv~~~y~~la~~~~--~~~~~IDa~-~~~eei~~~I~~~i~~~  211 (225)
T Consensus       144 ----------p~~lle---SQf~~LE~p~~~e~div~isv~~~~~e~iv~tI~k~~~~~  189 (191)
T KOG3354         144 ----------PADLLE---SQFATLEAPDADEEDIVTISVKTYSVEEIVDTIVKMVALN  189 (191)
T ss_pred             ----------CHHHHH---HHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf             ----------878999---8887526999982466888603478999999999999853