HHsearch alignment for GI: 254780218 and conserved domain: KOG4238

Probab=97.20  E-value=0.0015  Score=41.45  Aligned_cols=117  Identities=21%  Similarity=0.313  Sum_probs=74.2

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88689986788879799999999999977981999877889844100110012444541013456777889999977635
Q gi|254780218|r    3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENV   82 (225)
Q Consensus         3 ~g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~~~   82 (225)
T Consensus        49 rgctvw~tglsgagkttis~ale~~l~~~gipcy~-------ldgdnirhgl--~knlgfs~e--------dreenirri  111 (627)
T KOG4238          49 RGCTVWLTGLSGAGKTTISFALEEYLVSHGIPCYS-------LDGDNIRHGL--NKNLGFSPE--------DREENIRRI  111 (627)
T ss_pred             CCEEEEEEECCCCCCCEEEHHHHHHHHHCCCCCCC-------CCCCHHHHHH--HHCCCCCHH--------HHHHHHHHH
T ss_conf             55158743047788524207899999865985103-------4760266655--412698835--------578889999


Q ss_pred             HH--HHHCCCCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHH
Q ss_conf             65--542345258723542431000100344424577654442038898411566520348776443
Q gi|254780218|r   83 IR--PALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRV  147 (225)
Q Consensus        83 I~--p~L~~g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri  147 (225)
T Consensus       112 aevaklfadag-lvcitsfispf~-------~dr~~arkihe~~---~l~f~ev~v~a~l~vceqrd  167 (627)
T KOG4238         112 AEVAKLFADAG-LVCITSFISPFA-------KDRENARKIHESA---GLPFFEVFVDAPLNVCEQRD  167 (627)
T ss_pred             HHHHHHHHCCC-CEEHHHHCCHHH-------HHHHHHHHHHCCC---CCCEEEEEECCCHHHHHCCC
T ss_conf             99999873577-142103348344-------3035566541026---98629998247056653037