HHsearch alignment for GI: 254780218 and conserved domain: PRK00131
>PRK00131 aroK shikimate kinase; Reviewed.
Probab=99.34 E-value=2e-11 Score=88.48 Aligned_cols=174 Identities=24% Similarity=0.270 Sum_probs=90.8
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 98886899867888797999999999999779819998778898441001100124445410134567778899999776
Q gi|254780218|r 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVE 80 (225)
Q Consensus 1 M~~g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~ 80 (225)
T Consensus 1 ~~~~~nI~liG~~GsGKTtvgk~LA~~L---~~~fiD~D~~Ie~~~g~si~~if~~--------~Ge~~-F---R-~~E~ 64 (175)
T PRK00131 1 MLKGPNIVLIGMMGAGKSTIGRLLAKRL---GYEFIDTDHLIEARAGKSIPEIFEE--------EGEAG-F---R-ELEE 64 (175)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHH---CCCCCCCCHHHHHHHCCCHHHHHHH--------HCHHH-H---H-HHHH
T ss_conf 9999808988899999899999999995---9690239889997616999999998--------58899-9---9-9999
Q ss_pred HHHHHHHCCCCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 35655423452587235424310001003444245776544420388984115665203487764432111110000000
Q gi|254780218|r 81 NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 (225)
Q Consensus 81 ~~I~p~L~~g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~~~~~d 160 (225)
T Consensus 65 ~~l~~l~~~~~~VI------st----GGG~v~~~~~~~~L~-------~~g~vV~L~~~~e~l~~Rl~~~~~RPll~~~~ 127 (175)
T PRK00131 65 EVLAELLQRHNLVI------ST----GGGAVLREENRALLR-------ERGTVVYLDASFEELLRRLARDRNRPLLQTED 127 (175)
T ss_pred HHHHHHCCCCCEEE------EC----CCCCCCCHHHHHHHH-------CCCCEEEEECCHHHHHHHHCCCCCCCCCCCCC
T ss_conf 99996514798599------74----898226889999998-------16937998579999999864899998788998
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECC-CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 021128899999999999999978994999818-978899999999999999986
Q gi|254780218|r 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWELVQK 214 (225)
Q Consensus 161 ~~E~~~~~~~~kv~~~y~~la~~~~~~~~~IDa-~~~~eei~~~I~~~i~~~l~k 214 (225)
T Consensus 128 ~~~~l-~~l~~~R~~~Y~~~A----d--~~Idt~~~s~~ei~~~Ii~~L~~~~~~ 175 (175)
T PRK00131 128 PKEKL-RALYEERDPLYEEVA----D--LTIETDRRSPEEVVNEILELLELLLRR 175 (175)
T ss_pred HHHHH-HHHHHHHHHHHHHHC----C--EEEECCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 69999-999999999897538----9--999899999999999999999998529