HHsearch alignment for GI: 254780218 and conserved domain: PRK04195
>PRK04195 replication factor C large subunit; Provisional.
Probab=94.90 E-value=0.051 Score=32.29 Aligned_cols=46 Identities=17% Similarity=0.188 Sum_probs=32.4
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCC
Q ss_conf 68998678887979999999999997798199987788984410011001
Q gi|254780218|r 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 (225)
Q Consensus 5 ~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l 54 (225)
T Consensus 41 k~lLL~GPpGvGKTT~a~~lAk~~---g~~viElN-ASD~R~~~~I~~~i 86 (403)
T PRK04195 41 KALLLYGPPGVGKTSLAHALANDY---GWEVIELN-ASDQRTKDVIERVA 86 (403)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH---CCCEEEEC-CCCCCCHHHHHHHH
T ss_conf 469988939987999999999984---99859977-10114789999999