HHsearch alignment for GI: 254780218 and conserved domain: PRK06526
>PRK06526 transposase; Provisional.
Probab=94.95 E-value=0.14 Score=29.76 Aligned_cols=40 Identities=20% Similarity=0.077 Sum_probs=33.8
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 8886899867888797999999999999779819998778
Q gi|254780218|r 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41 (225)
Q Consensus 2 ~~g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP 41 (225)
T Consensus 96 ~~~~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~ 135 (254)
T PRK06526 96 TGKENVVFLGPPGTGKTHLAIGLGIRACQAGHRVLFATAA 135 (254)
T ss_pred HCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHH
T ss_conf 6588789989999868999999999999869967998779