HHsearch alignment for GI: 254780218 and conserved domain: PRK07933

>PRK07933 thymidylate kinase; Validated.
Probab=100.00  E-value=0  Score=383.79  Aligned_cols=203  Identities=21%  Similarity=0.327  Sum_probs=177.4

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC--CCCCCCCHHHHCCCCCCCC-CCHHHHHHHHHHHHHHHHHHH
Q ss_conf             6899867888797999999999999779819998778--8984410011001244454-101345677788999997763
Q gi|254780218|r    5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-EFGAEAEAIVFAAARLDHVEN   81 (225)
Q Consensus         5 ~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP--~~t~~ge~ir~~l~~~~~~-~~~~~~~~lLfaadr~~~~~~   81 (225)
T Consensus         1 m~I~fEGiDGsGKSTq~~~L~~~L~~~g~~v~~~reP~~g~~~~g~~ir~~l~~~~~~~~~~~~~~~lLfaadR~~~~~~   80 (213)
T PRK07933          1 MLIAIEGVDGAGKRTLTEALRAALEAAGRSVATLAFPRYGRSVHADLAAEALHGRHGDLADSVYAMATLFALDRAGARDE   80 (213)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             98999889999899999999999997799079984689999848999999980887776577799999999999999999


Q ss_pred             HHHHHHCCCCEEEECCCCCCCEEHHCCC--CCCCHHHHHHHHHH---HCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHC
Q ss_conf             5655423452587235424310001003--44424577654442---038898411566520348776443211111000
Q gi|254780218|r   82 VIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES  156 (225)
Q Consensus        82 ~I~p~L~~g~iVI~DRy~~S~lAYQ~~~--~~~~~~~i~~l~~~---~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~~  156 (225)
T Consensus        81 -I~paL~~G~~VI~DRy~~Ss~AYQ~a~~~~~~~~~~~~~i~~l~~~~~~~~~PDlti~lDv~~e~a~~R~~~R~~~~~~  159 (213)
T PRK07933         81 -LAGLVAAHDVVILDRYVASNAAYSAARLHQDADGEAVAWVAELEFGRLGLPVPDLQVLLDVPAELAAERARRRAARDAD  159 (213)
T ss_pred             -HHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCC
T ss_conf             -9999978898998174306898611014687542689999999877507999986889538999999999832456666


Q ss_pred             CHHHHHHHCCHHHHHHHHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf             0000021128899999999999999978-9949998189788999999999999
Q gi|254780218|r  157 ACLDYFERKDVMIHEKRRQIFLDIARNQ-PDRCHIVDSAHSFQSVATNILNIVW  209 (225)
Q Consensus       157 ~~~d~~E~~~~~~~~kv~~~y~~la~~~-~~~~~~IDa~~~~eei~~~I~~~i~  209 (225)
T Consensus       160 ~~~Dr~E~~-~~f~~rVr~~y~~lA~~~~p~R~~vIDa~~~~e~V~~~I~~~l~  212 (213)
T PRK07933        160 RARDAYERD-DGLQQRTGAVYAELAARGWGGPWLVVDPDVDPAALAARLAAALG  212 (213)
T ss_pred             CCCCCHHHH-HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHC
T ss_conf             421302304-89999999999999972579988998199999999999998748