HHsearch alignment for GI: 254780218 and conserved domain: PRK08154
>PRK08154 anaerobic benzoate catabolism transcriptional regulator; Reviewed.
Probab=98.65 E-value=2.8e-06 Score=57.76 Aligned_cols=167 Identities=18% Similarity=0.179 Sum_probs=85.4
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68998678887979999999999997798199987788984410011001244454101345677788999997763565
Q gi|254780218|r 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIR 84 (225)
Q Consensus 5 ~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~~~I~ 84 (225)
T Consensus 134 ~rIaLIGlmGaGKSTvGr~LA~~L---g~pFvDlD~~IEk~aG~sI~eIFa--------~~GE~~----FR~-~E~~~L~ 197 (304)
T PRK08154 134 PRIALIGLRGAGKSTLGRMLAARL---GVPFVELNREIEREAGLSVSEIFA--------LYGQEG----YRR-LERRALE 197 (304)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHH---CCCEEECHHHHHHHHCCCHHHHHH--------HHCHHH----HHH-HHHHHHH
T ss_conf 847988999998889999999995---989778779999992999999999--------868899----999-9999999
Q ss_pred HHHCC-CCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHC-CHHHHH
Q ss_conf 54234-5258723542431000100344424577654442038898411566520348776443211111000-000002
Q gi|254780218|r 85 PALME-GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES-ACLDYF 162 (225)
Q Consensus 85 p~L~~-g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~~-~~~d~~ 162 (225)
T Consensus 198 ~ll~~~~~~VIAt----------GGGiV~~~~n~~~L~~~-------g~vVwL~aspe~l~~Rv~~~gd~RPLl~~~~a~ 260 (304)
T PRK08154 198 RLIAEHEEMVLAT----------GGGIVSEPATFDLLLSH-------CYTVWLKASPEEHMARVRAQGDLRPMADNREAM 260 (304)
T ss_pred HHHHCCCCEEEEE----------CCCCCCCHHHHHHHHHC-------CEEEEEECCHHHHHHHHHCCCCCCCCCCCCCHH
T ss_conf 9871169989972----------87212788999999968-------989999799999999986489999999998889
Q ss_pred HHCCHHHHHHHHHHHHHHHHHCCCCEEEECC-CCCHHHHHHHHHHHHHHHH
Q ss_conf 1128899999999999999978994999818-9788999999999999999
Q gi|254780218|r 163 ERKDVMIHEKRRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWELV 212 (225)
Q Consensus 163 E~~~~~~~~kv~~~y~~la~~~~~~~~~IDa-~~~~eei~~~I~~~i~~~l 212 (225)
T Consensus 261 e~L~-~ll~~R~plY~~-----AD--~~IdTsg~tvees~~~L~~lv~~~~ 303 (304)
T PRK08154 261 EDLR-RILASREPLYAR-----AD--AVVDTSGLTVEASLARLRELVRPAL 303 (304)
T ss_pred HHHH-HHHHHHHHHHHH-----CC--EEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 9999-999987889986-----89--8987999999999999999999860