HHsearch alignment for GI: 254780218 and conserved domain: PRK09183

>PRK09183 transposase/IS protein; Provisional.
Probab=95.41  E-value=0.1  Score=30.46  Aligned_cols=40  Identities=25%  Similarity=0.171  Sum_probs=33.9

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             8886899867888797999999999999779819998778
Q gi|254780218|r    2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP   41 (225)
Q Consensus         2 ~~g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP   41 (225)
T Consensus        99 ~~~~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~  138 (258)
T PRK09183         99 ERNENIVLLGPSGVGKTHLAIALGYEAVRAGIKVRFTTAA  138 (258)
T ss_pred             HCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHH
T ss_conf             5588679989999868999999999999879939997899