HHsearch alignment for GI: 254780218 and conserved domain: PRK12338
>PRK12338 hypothetical protein; Provisional.
Probab=97.91 E-value=0.00089 Score=42.80 Aligned_cols=174 Identities=16% Similarity=0.138 Sum_probs=85.0
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCC-----------------CCH
Q ss_conf 988868998678887979999999999997798199987788984410011001244454-----------------101
Q gi|254780218|r 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-----------------EFG 63 (225)
Q Consensus 1 M~~g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~-----------------~~~ 63 (225)
T Consensus 1 mr~PliILiGGtSGvGKSTlAseLAsRL---gI~tvIs----TDsIRevmR~~is~e~~P~L~~STY~A~~~Lr~~~~~~ 73 (320)
T PRK12338 1 MRKPYVILIGSASGIGKSTIASEVARRL---NIKHLIE----TDFIREVVRGIIGKEYAPALHMSSYNAYTALRDKDHFV 73 (320)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHC---CCCEEEC----CHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 9976799970688876888999999851---9871103----34799999983380415345542026788726742357
Q ss_pred HHH-HHHHHHHHHH-------HHHHHHHHHHHCCCCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 345-6777889999-------97763565542345258723542431000100344424577654442038898411566
Q gi|254780218|r 64 AEA-EAIVFAAARL-------DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTII 135 (225)
Q Consensus 64 ~~~-~~lLfaadr~-------~~~~~~I~p~L~~g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~ 135 (225)
T Consensus 74 ~~~~~~~-vi~Gfe~q~e~V~~~le~vI~r~~~~~~sivIE----------GV-HLvPg-fi~~~~~-~---~~~~i~F~ 136 (320)
T PRK12338 74 PKRFEEL-VIAGFEEHASFVIPAIEKVIKRAVTDADDIVIE----------GV-HLVPG-LINIEQF-Y---EYANIHFF 136 (320)
T ss_pred CCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE----------EE-EECHH-HCCHHHH-C---CCCCCEEE
T ss_conf 7411678-999999998999999999999998648867998----------45-30555-5057662-2---66663699
Q ss_pred -EEECHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHH---HHHHHHHHHHHCCCCEEEECC---CCCHHHHHHHHHH
Q ss_conf -5203487764432111110000000021128899999---999999999978994999818---9788999999999
Q gi|254780218|r 136 -LDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIARNQPDRCHIVDS---AHSFQSVATNILN 206 (225)
Q Consensus 136 -Ldv~~e~a~~Ri~~R~~~~~~~~~d~~E~~~~~~~~k---v~~~y~~la~~~~~~~~~IDa---~~~~eei~~~I~~ 206 (225)
T Consensus 137 i~~~~E~kH~eRF~~Rak~m~r~--~Ky----vkyf~niR~Iqd~L~~~Adeh~--iP~I~N~nid~sV~~i~~~I~~ 206 (320)
T PRK12338 137 ILYADEEEHKERFVKRAMEIKRG--GKH----LEYFRENRIIHDFLVSQADEHG--IPVIKNDDIDRTVSKVLSVIRE 206 (320)
T ss_pred EEECCHHHHHHHHHHHHHHHHCC--CCH----HHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99817689999999999885026--508----9999988999999984167619--9730476355689999999998