HHsearch alignment for GI: 254780218 and conserved domain: PRK12377
>PRK12377 putative replication protein; Provisional.
Probab=95.38 E-value=0.14 Score=29.71 Aligned_cols=39 Identities=23% Similarity=0.220 Sum_probs=32.8
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 888689986788879799999999999977981999877
Q gi|254780218|r 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 (225)
Q Consensus 2 ~~g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~e 40 (225)
T Consensus 99 ~~~~NlIf~G~pGtGKTHLA~AIg~~a~~~G~sVlF~t~ 137 (248)
T PRK12377 99 TGCTNFVFSGKPGTGKNHLAAAIGNRLLAKGRSVIVVTV 137 (248)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEH
T ss_conf 188608998999987889999999999987996999889