HHsearch alignment for GI: 254780218 and conserved domain: PRK12726
>PRK12726 flagellar biosynthesis regulator FlhF; Provisional.
Probab=97.73 E-value=0.00021 Score=46.49 Aligned_cols=42 Identities=31% Similarity=0.291 Sum_probs=36.4
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 88868998678887979999999999997798199987788984
Q gi|254780218|r 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP 45 (225)
Q Consensus 2 ~~g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~ 45 (225)
T Consensus 204 ~~g~VIaLVGvnGvGKTTTiAKLA~~l~~~gkkV~LVA--aDTF 245 (407)
T PRK12726 204 SNHRIISLIGQTGVGKTTTLVKLGWQLLKQNRTVGFIT--TDTF 245 (407)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE--CCCC
T ss_conf 36908999899989789999999999997799179997--0667