HHsearch alignment for GI: 254780218 and conserved domain: PRK13537
>PRK13537 lipooligosaccharide transporter ATP-binding subunit; Provisional.
Probab=95.45 E-value=0.015 Score=35.48 Aligned_cols=36 Identities=25% Similarity=0.386 Sum_probs=27.9
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 888689986788879799999999999977981999
Q gi|254780218|r 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 (225)
Q Consensus 2 ~~g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~ 37 (225)
T Consensus 29 ~~Gei~gllGpNGAGKTTli~~l~Gl~~p~sG~v~i 64 (304)
T PRK13537 29 QPGECFGLLGPNGAGKTTTLKMLLGLTHPDAGTISL 64 (304)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
T ss_conf 699599999998972999999997795689768999