HHsearch alignment for GI: 254780218 and conserved domain: PRK13947

>PRK13947 shikimate kinase; Provisional.
Probab=99.02  E-value=7.9e-09  Score=72.95  Aligned_cols=167  Identities=20%  Similarity=0.202  Sum_probs=85.2

Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             98886899867888797999999999999779819998778898441001100124445410134567778899999776
Q gi|254780218|r    1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVE   80 (225)
Q Consensus         1 M~~g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~   80 (225)
T Consensus         1 mkn---I~LiG~mGsGKTtiGk~La~~L---~~~fiD~D~~Ie~~~g~sI~eIf~~~--------GE~~-F---R-~~E~   61 (171)
T PRK13947          1 MKN---IVLIGFMGTGKTTVGKKVATTL---SFGFIDTDKEIEKMAGMTVSEIFEKD--------GEVR-F---R-SLEK   61 (171)
T ss_pred             CCC---EEEECCCCCCHHHHHHHHHHHH---CCCEEECHHHHHHHCCCCHHHHHHHH--------CHHH-H---H-HHHH
T ss_conf             985---8997999998899999999997---96989874999988299889999984--------8999-9---9-9999


Q ss_pred             HHHHHHHCCCCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHH
Q ss_conf             35655423452587235424310001003444245776544420388984115665203487764432111110000000
Q gi|254780218|r   81 NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD  160 (225)
Q Consensus        81 ~~I~p~L~~g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~~~~~d  160 (225)
T Consensus        62 ~~l~~~~~~~~~Vist----------GGG~v~~~~n~~~l~~-------~g~vi~L~~~~~~l~~Rl~~~~~RPll~~~~  124 (171)
T PRK13947         62 AAVRKAARLKNLVIAT----------GGGVVLNPENIVQLRK-------NGVLICLVARPEVILRRIKKKKDRPLLMVGN  124 (171)
T ss_pred             HHHHHHCCCCCEEEEC----------CCCCCCCHHHHHHHHH-------CCEEEEECCCHHHHHHHHHCCCCCCCCCCCC
T ss_conf             9999740368979978----------9850069999999996-------8989997399999999972899999798998


Q ss_pred             HHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEC-CCCCHHHHHHHHHHHHHHH
Q ss_conf             02112889999999999999997899499981-8978899999999999999
Q gi|254780218|r  161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVD-SAHSFQSVATNILNIVWEL  211 (225)
Q Consensus       161 ~~E~~~~~~~~kv~~~y~~la~~~~~~~~~ID-a~~~~eei~~~I~~~i~~~  211 (225)
T Consensus       125 ~~~~l-~~l~~~R~~~Y-~~A----d--~~I~~~~~s~~ei~~~Ii~~~~k~  168 (171)
T PRK13947        125 PEERI-RELLKEREPFY-RFA----D--FTIDTSDMTIDEVAEEIIKAYIKL  168 (171)
T ss_pred             HHHHH-HHHHHHHHHHH-HHC----C--EEEECCCCCHHHHHHHHHHHHHHH
T ss_conf             79999-99999999999-976----9--898899899999999999999972