HHsearch alignment for GI: 254780218 and conserved domain: PRK13947
>PRK13947 shikimate kinase; Provisional.
Probab=99.02 E-value=7.9e-09 Score=72.95 Aligned_cols=167 Identities=20% Similarity=0.202 Sum_probs=85.2
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 98886899867888797999999999999779819998778898441001100124445410134567778899999776
Q gi|254780218|r 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVE 80 (225)
Q Consensus 1 M~~g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~ 80 (225)
T Consensus 1 mkn---I~LiG~mGsGKTtiGk~La~~L---~~~fiD~D~~Ie~~~g~sI~eIf~~~--------GE~~-F---R-~~E~ 61 (171)
T PRK13947 1 MKN---IVLIGFMGTGKTTVGKKVATTL---SFGFIDTDKEIEKMAGMTVSEIFEKD--------GEVR-F---R-SLEK 61 (171)
T ss_pred CCC---EEEECCCCCCHHHHHHHHHHHH---CCCEEECHHHHHHHCCCCHHHHHHHH--------CHHH-H---H-HHHH
T ss_conf 985---8997999998899999999997---96989874999988299889999984--------8999-9---9-9999
Q ss_pred HHHHHHHCCCCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 35655423452587235424310001003444245776544420388984115665203487764432111110000000
Q gi|254780218|r 81 NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 (225)
Q Consensus 81 ~~I~p~L~~g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~~~~~d 160 (225)
T Consensus 62 ~~l~~~~~~~~~Vist----------GGG~v~~~~n~~~l~~-------~g~vi~L~~~~~~l~~Rl~~~~~RPll~~~~ 124 (171)
T PRK13947 62 AAVRKAARLKNLVIAT----------GGGVVLNPENIVQLRK-------NGVLICLVARPEVILRRIKKKKDRPLLMVGN 124 (171)
T ss_pred HHHHHHCCCCCEEEEC----------CCCCCCCHHHHHHHHH-------CCEEEEECCCHHHHHHHHHCCCCCCCCCCCC
T ss_conf 9999740368979978----------9850069999999996-------8989997399999999972899999798998
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEC-CCCCHHHHHHHHHHHHHHH
Q ss_conf 02112889999999999999997899499981-8978899999999999999
Q gi|254780218|r 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVD-SAHSFQSVATNILNIVWEL 211 (225)
Q Consensus 161 ~~E~~~~~~~~kv~~~y~~la~~~~~~~~~ID-a~~~~eei~~~I~~~i~~~ 211 (225)
T Consensus 125 ~~~~l-~~l~~~R~~~Y-~~A----d--~~I~~~~~s~~ei~~~Ii~~~~k~ 168 (171)
T PRK13947 125 PEERI-RELLKEREPFY-RFA----D--FTIDTSDMTIDEVAEEIIKAYIKL 168 (171)
T ss_pred HHHHH-HHHHHHHHHHH-HHC----C--EEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 79999-99999999999-976----9--898899899999999999999972