HHsearch alignment for GI: 254780218 and conserved domain: PRK13951
>PRK13951 bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional.
Probab=98.39 E-value=6.1e-06 Score=55.72 Aligned_cols=113 Identities=18% Similarity=0.254 Sum_probs=61.3
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68998678887979999999999997798199987788984410011001244454101345677788999997763565
Q gi|254780218|r 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIR 84 (225)
Q Consensus 5 ~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~~~I~ 84 (225)
T Consensus 1 m~I~LiG~mGaGKTtvGr~LA~~L---~~~FvD~D~~Ie~~~G~sI~eIF~~--------~GE~~-F---R-~~E~~~l~ 64 (488)
T PRK13951 1 MRIFLVGMMGSGKSTIGKRISEVL---DLQFIDMDEEIERREGRSVRRIFEE--------DGEEY-F---R-LKEKELLR 64 (488)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH---CCCEEECHHHHHHHHCCCHHHHHHH--------HCHHH-H---H-HHHHHHHH
T ss_conf 949998999998779999999983---9795647799999859988899988--------78899-9---9-99999999
Q ss_pred HHHCCCCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHH
Q ss_conf 5423452587235424310001003444245776544420388984115665203487764432111
Q gi|254780218|r 85 PALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 (225)
Q Consensus 85 p~L~~g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~ 151 (225)
T Consensus 65 ~l~~~~~~Viat----------GGGavl~~~nr~~L~~--------~~vV~L~a~~e~l~~R~~~~~ 113 (488)
T PRK13951 65 ELVERDNVVVAT----------GGGVVIDPENRELLKK--------EKTLFLYAPPEVLMERVTTEN 113 (488)
T ss_pred HHHCCCCEEEEC----------CCCCCCCHHHHHHHHC--------CCEEEEECCHHHHHHHHCCCC
T ss_conf 986089969976----------9823289999999964--------988999899999999837899