HHsearch alignment for GI: 254780218 and conserved domain: PRK13973

>PRK13973 thymidylate kinase; Provisional.
Probab=100.00  E-value=0  Score=432.02  Aligned_cols=213  Identities=50%  Similarity=0.810  Sum_probs=201.3

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             88868998678887979999999999997798199987788984410011001244454101345677788999997763
Q gi|254780218|r    2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVEN   81 (225)
Q Consensus         2 ~~g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~~   81 (225)
T Consensus         1 MkG~fIv~EGiDGsGKsTq~~~L~~~L~~~g~~v~~trePg~t~~~e~ir~~ll~~~~~~~~~~~e~lLfaA~R~eh~~~   80 (216)
T PRK13973          1 MRGRFITFEGGEGAGKSTQIRLLAERLRAAGYDVLVTREPGGSPGAEAIRHVLLSGAAELYGPAMEALLFAAARDDHVEE   80 (216)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             98249998899999899999999999997799579940989984089999998466657899899999999999999999


Q ss_pred             HHHHHHCCCCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf             56554234525872354243100010034442457765444203889841156652034877644321111100000000
Q gi|254780218|r   82 VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY  161 (225)
Q Consensus        82 ~I~p~L~~g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~~~~~d~  161 (225)
T Consensus        81 ~I~paL~~g~~VI~DRy~~Ss~AYQg~~~~~~~~~l~~l~~~~~~~~~PDlti~LDv~~e~a~~R~~~R~~---~~~~dr  157 (216)
T PRK13973         81 VIRPALARGKIVLCDRFIDSTRAYQGVTGNVDPALLAALERVAINGVMPDLTLILDIPAEVGLERAAKRRG---SETPDR  157 (216)
T ss_pred             HHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCC---CCCCCH
T ss_conf             99999977998986786257999977427889899999999996799999899981888999999998357---763002


Q ss_pred             HHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             21128899999999999999978994999818978899999999999999986426
Q gi|254780218|r  162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS  217 (225)
Q Consensus       162 ~E~~~~~~~~kv~~~y~~la~~~~~~~~~IDa~~~~eei~~~I~~~i~~~l~k~~~  217 (225)
T Consensus       158 ~E~~~~~f~~kVr~~Y~~la~~~~~r~~vIDa~~s~eeV~~~I~~~v~~~L~e~~~  213 (216)
T PRK13973        158 FEKEDLAFHEKRREAFLQIAAQEPERCVVIDADASPEAVAAEIWAAVDQRLLEAAA  213 (216)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf             55647999999999999999859887899719999999999999999998621000