HHsearch alignment for GI: 254780218 and conserved domain: PRK13975

>PRK13975 thymidylate kinase; Provisional.
Probab=100.00  E-value=0  Score=351.07  Aligned_cols=188  Identities=30%  Similarity=0.531  Sum_probs=165.0

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             86899867888797999999999999779819998778898441001100124445410134567778899999776356
Q gi|254780218|r    4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVI   83 (225)
Q Consensus         4 g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~~~I   83 (225)
T Consensus         2 ~kfI~fEGiDGsGKsTq~~lL~~~L~-----~~~t~epg~t~~ge~IR~~l~~---~~~~~~~~~LLfaA~R~~~~~~-i   72 (198)
T PRK13975          2 NKFIVFEGIDGSGKTTQAKLLAEKLN-----AKFTFEPTDGKIGKSIREILSG---SECQKETLALLFAADRVEHVSE-I   72 (198)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHCC-----CCEEECCCCCCHHHHHHHHHHC---CCCCHHHHHHHHHHHHHHHHHH-H
T ss_conf             98899989988869999999999738-----7488897998447999999826---8998599999999999999999-9


Q ss_pred             HHHHCCCCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             55423452587235424310001003444245776544420388984115665203487764432111110000000021
Q gi|254780218|r   84 RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE  163 (225)
Q Consensus        84 ~p~L~~g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~~~~~d~~E  163 (225)
T Consensus        73 ~~~l~~~-~VI~DRy~~St~AYQ~~-~g~~~~~i~~l~~~~---~~PDlt~~LDi~~e~~l~R~~~r~~-------~~~e  140 (198)
T PRK13975         73 EEDLKKS-HVVSDRYVYSSIVYQSS-QGIDKDFIYSINDYA---KIPDLVVLLDVDLEEALKRMESREK-------EIFE  140 (198)
T ss_pred             HHHHHCC-CEEEECCCCHHHHHHHH-CCCCHHHHHHHHHCC---CCCCEEEEECCCHHHHHHHHHCCCC-------HHHH
T ss_conf             9998689-88972761239998561-399999999999679---9999899973989999998763573-------1554


Q ss_pred             HCCHHHHHHHHHHHHHHHHHCCCC------EEEECC-CCCHHHHHHHHHHHHHHHHHH
Q ss_conf             128899999999999999978994------999818-978899999999999999986
Q gi|254780218|r  164 RKDVMIHEKRRQIFLDIARNQPDR------CHIVDS-AHSFQSVATNILNIVWELVQK  214 (225)
Q Consensus       164 ~~~~~~~~kv~~~y~~la~~~~~~------~~~IDa-~~~~eei~~~I~~~i~~~l~k  214 (225)
T Consensus       141 --~~~f~~kVr~~yl~la~~~~~r~~~~~~~i~Id~~~ksieeV~~~I~~~i~~~lp~  196 (198)
T PRK13975        141 --KIEIQKKIKEGYYNLINSENEKFMPKYGFIVIDTTSKSIEEVFNEILNAILDKIPD  196 (198)
T ss_pred             --HHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHC
T ss_conf             --29999999999999997482310012571899899999999999999999986310