HHsearch alignment for GI: 254780218 and conserved domain: TIGR01846
>TIGR01846 type_I_sec_HlyB type I secretion system ATPase; InterPro: IPR010132 Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This entry contains one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N terminus, but rather carry signals located toward the extreme C terminus to direct type I secretion.; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0015031 protein transport, 0016021 integral to membrane.
Probab=96.44 E-value=0.0032 Score=39.50 Aligned_cols=27 Identities=37% Similarity=0.625 Sum_probs=23.8
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 988868998678887979999999999
Q gi|254780218|r 1 MNSGLFISFEGIEGAGKTTHISLLKRF 27 (225)
Q Consensus 1 M~~g~~I~iEGiDGsGKsTq~~~L~~~ 27 (225)
T Consensus 488 I~~Ge~IGIvGpSGSGKSTLTKL~QRL 514 (703)
T TIGR01846 488 IKPGEVIGIVGPSGSGKSTLTKLLQRL 514 (703)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 578657998727898678999998861