HHsearch alignment for GI: 254780218 and conserved domain: TIGR03574
>TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Members of this protein are L-seryl-tRNA(Sec) kinase. This enzyme is part of a two-step pathway in Eukaryota and Archaea for performing selenocysteine biosynthesis by changing serine misacylated on selenocysteine-tRNA to selenocysteine. This enzyme performs the first step, phosphorylation of the OH group of the serine side chain. This family represents archaeal proteins with this activity.
Probab=99.39 E-value=2.1e-11 Score=88.29 Aligned_cols=161 Identities=21% Similarity=0.252 Sum_probs=94.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89986788879799999999999977981999877889844100110012444541013456777889999977635655
Q gi|254780218|r 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRP 85 (225)
Q Consensus 6 ~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~~~I~p 85 (225)
T Consensus 1 Livl~GlP~SGKSt~a~~L~~~l~~~~~~~i~~~-------~d~~~~~~~~-----~~~~~Ek~----~r~~-~~~~v~~ 63 (249)
T TIGR03574 1 LIILTGLPGVGKSTFSKELSKKLSEKNIDNIILG-------TDLIRESFPV-----WKEKYEEF----IRDS-TLYLIKT 63 (249)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEC-------CCCCHHHHHH-----CCHHHHHH----HHHH-HHHHHHH
T ss_conf 9789678999899999999999998299659965-------5200212000-----33677999----8999-9999999
Q ss_pred HHCCCCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHC
Q ss_conf 42345258723542431000100344424577654442038898411566520348776443211111000000002112
Q gi|254780218|r 86 ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 (225)
Q Consensus 86 ~L~~g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~~~~~d~~E~~ 165 (225)
T Consensus 64 ~l~~~~~vI~D----~~nYiKg~RY--------EL~clAk~~~t~~c~I~~~~p~e~c~~~N~~R~~~-----------~ 120 (249)
T TIGR03574 64 ALKNKYSVIVD----DTNYYNSKRR--------DLINIAKEYNKNYIIIYLKAPLDTLLRRNIERGEK-----------I 120 (249)
T ss_pred HHCCCCEEEEC----CCCHHHHHHH--------HHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCC-----------C
T ss_conf 84337669972----7327889999--------99999998499869999739999999987606899-----------9
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCE----EEECCC--CCHHHHHHHHHHHH
Q ss_conf 88999999999999999789949----998189--78899999999999
Q gi|254780218|r 166 DVMIHEKRRQIFLDIARNQPDRC----HIVDSA--HSFQSVATNILNIV 208 (225)
Q Consensus 166 ~~~~~~kv~~~y~~la~~~~~~~----~~IDa~--~~~eei~~~I~~~i 208 (225)
T Consensus 121 ~~e~i~~m~~r~E~P~--~~nrWdsplf~i~~~~~~~~~~i~~~l~e~~ 167 (249)
T TIGR03574 121 PNEVIKDMYEKFDEPG--TKYSWDLPDITIDTTKKIDYNEILEEILEIS 167 (249)
T ss_pred CHHHHHHHHHHHCCCC--CCCCCCCCCEEECCCCCCCHHHHHHHHHHHH
T ss_conf 9999999999707999--8986557816842898889999999999985