HHsearch alignment for GI: 254780218 and conserved domain: TIGR03575
>TIGR03575 selen_PSTK_euk L-seryl-tRNA(Sec) kinase, eukaryotic. Members of this protein are L-seryl-tRNA(Sec) kinase. This enzyme is part of a two-step pathway in Eukaryota and Archaea for performing selenocysteine biosynthesis by changing serine misacylated on selenocysteine-tRNA to selenocysteine. This enzyme performs the first step, phosphorylation of the OH group of the serine side chain. This family represents eukaryotic proteins with this activity.
Probab=98.63 E-value=1.8e-07 Score=64.90 Aligned_cols=177 Identities=20% Similarity=0.277 Sum_probs=86.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHC-CCCEEEEEC----CC------CCC----CCCHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 9986788879799999999999977-981999877----88------984----41001100124445410134567778
Q gi|254780218|r 7 ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTRE----PG------GTP----AAEAARHVLLSCGVDEFGAEAEAIVF 71 (225)
Q Consensus 7 I~iEGiDGsGKsTq~~~L~~~L~~~-g~~v~~~~e----P~------~t~----~ge~ir~~l~~~~~~~~~~~~~~lLf 71 (225)
T Consensus 2 CVLcGLPaAGKTTLar~L~~~l~~~~gw~v~vI~YDdlIp~~~~e~e~~~~~~s~WK~~Rq~lL--------k~LE~fl~ 73 (340)
T TIGR03575 2 CVLCGLPAAGKSTLARSLSATLRRERGWAVAVITYDDIIPEAAFELDQSREIPSQWKQFRQELL--------KYLEHFLV 73 (340)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCHHHHCCCCCCCCHHHHHHHHHHHH--------HHHHHHHH
T ss_conf 0432698787368999999998644476058986212142545312357766137999999999--------99999999
Q ss_pred H-H-----------------HHHHHHHH-----------------HHHHHHCCCCEEEEC-CCCCCCEEHHCCCCCCCHH
Q ss_conf 8-9-----------------99997763-----------------565542345258723-5424310001003444245
Q gi|254780218|r 72 A-A-----------------ARLDHVEN-----------------VIRPALMEGKILLCD-RFLDSSYAYQGERDSSQHL 115 (225)
Q Consensus 72 a-a-----------------dr~~~~~~-----------------~I~p~L~~g~iVI~D-Ry~~S~lAYQ~~~~~~~~~ 115 (225)
T Consensus 74 al~n~~~~~~p~~~t~~~w~~fi~cL~eqgL~i~~~~~~~~~~~~l~~~~~~~pl~iiLDDNfyY~SMRye--------- 144 (340)
T TIGR03575 74 AVINGSELSAPPGKTEGMWEDFVDCLKEQGLIISSGASEAQGCHSLTKPAVSRPLCLVLDDNFYYQSMRYE--------- 144 (340)
T ss_pred HHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHH---------
T ss_conf 98453336787556752157777776522543345655344322002445677537995461488888999---------
Q ss_pred HHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCC--CE----E
Q ss_conf 77654442038898411566520348776443211111000000002112889999999999999997899--49----9
Q gi|254780218|r 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD--RC----H 189 (225)
Q Consensus 116 ~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~~~~~d~~E~~~~~~~~kv~~~y~~la~~~~~--~~----~ 189 (225)
T Consensus 145 -~yqLark~---~~gf~qi~l~c~le~cl~RN~~R~~pvp~~--------------tI~~M~~k~E~P~p~kn~WE~~Sl 206 (340)
T TIGR03575 145 -VYQLARKY---SLGFCQLFLDCPVESCLLRNKQRPVPLPDE--------------TIQLMGRKIEKPNPEKNAWEHNSL 206 (340)
T ss_pred -HHHHHHHH---CCCEEEEEECCCHHHHHHHCCCCCCCCCHH--------------HHHHHHHCCCCCCCCCCCCHHCEE
T ss_conf -99999981---875279886287999997402589999889--------------999999606899977676111236
Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 98189788999999999999999864264
Q gi|254780218|r 190 IVDSAHSFQSVATNILNIVWELVQKRVSP 218 (225)
Q Consensus 190 ~IDa~~~~eei~~~I~~~i~~~l~k~~~~ 218 (225)
T Consensus 207 ~i~s~~~~~e~~~~i~~ll~taL~nPv~~ 235 (340)
T TIGR03575 207 VIQSSACISEDSLEVTDLLNTALENPIKC 235 (340)
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 73267876415599999999997295645