HHsearch alignment for GI: 254780218 and conserved domain: TIGR03575

>TIGR03575 selen_PSTK_euk L-seryl-tRNA(Sec) kinase, eukaryotic. Members of this protein are L-seryl-tRNA(Sec) kinase. This enzyme is part of a two-step pathway in Eukaryota and Archaea for performing selenocysteine biosynthesis by changing serine misacylated on selenocysteine-tRNA to selenocysteine. This enzyme performs the first step, phosphorylation of the OH group of the serine side chain. This family represents eukaryotic proteins with this activity.
Probab=98.63  E-value=1.8e-07  Score=64.90  Aligned_cols=177  Identities=20%  Similarity=0.277  Sum_probs=86.4

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHC-CCCEEEEEC----CC------CCC----CCCHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf             9986788879799999999999977-981999877----88------984----41001100124445410134567778
Q gi|254780218|r    7 ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTRE----PG------GTP----AAEAARHVLLSCGVDEFGAEAEAIVF   71 (225)
Q Consensus         7 I~iEGiDGsGKsTq~~~L~~~L~~~-g~~v~~~~e----P~------~t~----~ge~ir~~l~~~~~~~~~~~~~~lLf   71 (225)
T Consensus         2 CVLcGLPaAGKTTLar~L~~~l~~~~gw~v~vI~YDdlIp~~~~e~e~~~~~~s~WK~~Rq~lL--------k~LE~fl~   73 (340)
T TIGR03575         2 CVLCGLPAAGKSTLARSLSATLRRERGWAVAVITYDDIIPEAAFELDQSREIPSQWKQFRQELL--------KYLEHFLV   73 (340)
T ss_pred             EEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCHHHHCCCCCCCCHHHHHHHHHHHH--------HHHHHHHH
T ss_conf             0432698787368999999998644476058986212142545312357766137999999999--------99999999


Q ss_pred             H-H-----------------HHHHHHHH-----------------HHHHHHCCCCEEEEC-CCCCCCEEHHCCCCCCCHH
Q ss_conf             8-9-----------------99997763-----------------565542345258723-5424310001003444245
Q gi|254780218|r   72 A-A-----------------ARLDHVEN-----------------VIRPALMEGKILLCD-RFLDSSYAYQGERDSSQHL  115 (225)
Q Consensus        72 a-a-----------------dr~~~~~~-----------------~I~p~L~~g~iVI~D-Ry~~S~lAYQ~~~~~~~~~  115 (225)
T Consensus        74 al~n~~~~~~p~~~t~~~w~~fi~cL~eqgL~i~~~~~~~~~~~~l~~~~~~~pl~iiLDDNfyY~SMRye---------  144 (340)
T TIGR03575        74 AVINGSELSAPPGKTEGMWEDFVDCLKEQGLIISSGASEAQGCHSLTKPAVSRPLCLVLDDNFYYQSMRYE---------  144 (340)
T ss_pred             HHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHH---------
T ss_conf             98453336787556752157777776522543345655344322002445677537995461488888999---------


Q ss_pred             HHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCC--CE----E
Q ss_conf             77654442038898411566520348776443211111000000002112889999999999999997899--49----9
Q gi|254780218|r  116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD--RC----H  189 (225)
Q Consensus       116 ~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~~~~~d~~E~~~~~~~~kv~~~y~~la~~~~~--~~----~  189 (225)
T Consensus       145 -~yqLark~---~~gf~qi~l~c~le~cl~RN~~R~~pvp~~--------------tI~~M~~k~E~P~p~kn~WE~~Sl  206 (340)
T TIGR03575       145 -VYQLARKY---SLGFCQLFLDCPVESCLLRNKQRPVPLPDE--------------TIQLMGRKIEKPNPEKNAWEHNSL  206 (340)
T ss_pred             -HHHHHHHH---CCCEEEEEECCCHHHHHHHCCCCCCCCCHH--------------HHHHHHHCCCCCCCCCCCCHHCEE
T ss_conf             -99999981---875279886287999997402589999889--------------999999606899977676111236


Q ss_pred             EECCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             98189788999999999999999864264
Q gi|254780218|r  190 IVDSAHSFQSVATNILNIVWELVQKRVSP  218 (225)
Q Consensus       190 ~IDa~~~~eei~~~I~~~i~~~l~k~~~~  218 (225)
T Consensus       207 ~i~s~~~~~e~~~~i~~ll~taL~nPv~~  235 (340)
T TIGR03575       207 VIQSSACISEDSLEVTDLLNTALENPIKC  235 (340)
T ss_pred             EECCCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf             73267876415599999999997295645