HHsearch alignment for GI: 254780218 and conserved domain: cd00984
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=95.14 E-value=0.066 Score=31.65 Aligned_cols=39 Identities=15% Similarity=0.181 Sum_probs=32.5
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHH-HHCCCCEEEEE
Q ss_conf 9888689986788879799999999999-97798199987
Q gi|254780218|r 1 MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTR 39 (225)
Q Consensus 1 M~~g~~I~iEGiDGsGKsTq~~~L~~~L-~~~g~~v~~~~ 39 (225)
T Consensus 10 ~~~G~L~vi~a~~g~GKS~~~~~la~~~a~~~g~~V~~~S 49 (242)
T cd00984 10 LQPGDLIIIAARPSMGKTAFALNIAENIAKKQGKPVLFFS 49 (242)
T ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 9998189999689999999999999999997799599993