HHsearch alignment for GI: 254780218 and conserved domain: cd01122

>cd01122 GP4d_helicase GP4d_helicase is a homohexameric 5'-3' helicases. Helicases couple NTP hydrolysis to the unwinding of nucleic acid duplexes into their component strands.
Probab=95.41  E-value=0.044  Score=32.72  Aligned_cols=39  Identities=21%  Similarity=0.243  Sum_probs=32.5

Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHH-HHHCCCCEEEEE
Q ss_conf             988868998678887979999999999-997798199987
Q gi|254780218|r    1 MNSGLFISFEGIEGAGKTTHISLLKRF-LQRKNYDVHVTR   39 (225)
Q Consensus         1 M~~g~~I~iEGiDGsGKsTq~~~L~~~-L~~~g~~v~~~~   39 (225)
T Consensus        27 l~~GeL~viaarpg~GKT~f~~~~a~~~~~~~g~~vl~~S   66 (271)
T cd01122          27 LRKGELIILTAGTGVGKTTFLREYALDLITQHGVRVGTIS   66 (271)
T ss_pred             CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf             9998089999689986999999999999997699089997