HHsearch alignment for GI: 254780218 and conserved domain: cd01131
>cd01131 PilT Pilus retraction ATPase PilT. PilT is a nucleotide binding protein responsible for the retraction of type IV pili, likely by pili disassembly. This retraction provides the force required for travel of bacteria in low water environments by a mechanism known as twitching motility.
Probab=95.09 E-value=0.042 Score=32.79 Aligned_cols=36 Identities=17% Similarity=0.497 Sum_probs=26.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCC-CCEEEEECC
Q ss_conf 899867888797999999999999779-819998778
Q gi|254780218|r 6 FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREP 41 (225)
Q Consensus 6 ~I~iEGiDGsGKsTq~~~L~~~L~~~g-~~v~~~~eP 41 (225)
T Consensus 3 liLitG~TGSGKTTtl~all~~i~~~~~~~IiTiEDP 39 (198)
T cd01131 3 LVLVTGPTGSGKSTTLAAMIDYINKNKTHHILTIEDP 39 (198)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 8999899999799999999985363788369996473