HHsearch alignment for GI: 254780218 and conserved domain: cd02020

>cd02020 CMPK Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor.
Probab=98.34  E-value=1e-05  Score=54.38  Aligned_cols=100  Identities=21%  Similarity=0.164  Sum_probs=53.4

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHH
Q ss_conf             899867888797999999999999779819998778898441001100124445410--134567778899999776356
Q gi|254780218|r    6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GAEAEAIVFAAARLDHVENVI   83 (225)
Q Consensus         6 ~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~~~--~~~~~~lLfaadr~~~~~~~I   83 (225)
T Consensus         1 iIaIdGpagsGKsT~ak~lA~~l---~~~~ldt--------G-~ir~~ev~~~~s~ia~~~~VR~~--------l~~~-Q   59 (147)
T cd02020           1 IIAIDGPAGSGKSTVAKLLAKKL---GLPYLDT--------G-GIRTEEVGKLASEVAAIPEVRKA--------LDER-Q   59 (147)
T ss_pred             CEEEECCCCCCHHHHHHHHHHHH---CCEEECC--------C-CCCCHHHHHHHHHHCCCHHHHHH--------HHHH-H
T ss_conf             98886899789899999999990---9907766--------5-42548998999998197889999--------9999-9


Q ss_pred             HHHHCCCCEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHH
Q ss_conf             554234525872354243100010034442457765444203889841156652034877644321
Q gi|254780218|r   84 RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQN  149 (225)
Q Consensus        84 ~p~L~~g~iVI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~  149 (225)
T Consensus        60 r~~~~~~~~V-~e--------------GRDig---tv-----V~P~A~lKifL~As~e~RA~RR~~  102 (147)
T cd02020          60 RELAKKPGIV-LE--------------GRDIG---TV-----VFPDADLKIFLTASPEVRAKRRAK  102 (147)
T ss_pred             HHHHHCCCEE-EE--------------CCCCC---CE-----ECCCCCEEEEEECCHHHHHHHHHH
T ss_conf             9997669968-97--------------13101---02-----446747677775898999999999