HHsearch alignment for GI: 254780218 and conserved domain: cd02034
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible oxidation of CO to CO2. CODH contains a nickel-iron-sulfur cluster (C-center) and an iron-sulfur cluster (B-center). CO oxidation occurs at the C-center. Three accessory proteins encoded by cooCTJ genes are involved in nickel incorporation into a nickel site. CooC functions as a nickel insertase that mobilizes nickel to apoCODH using energy released from ATP hydrolysis. CooC is a homodimer and has NTPase activities. Mutation at the P-loop abolishs its function.
Probab=95.96 E-value=0.015 Score=35.43 Aligned_cols=33 Identities=39% Similarity=0.530 Sum_probs=30.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 998678887979999999999997798199987
Q gi|254780218|r 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39 (225)
Q Consensus 7 I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~ 39 (225)
T Consensus 2 ia~~GKGGvGKtt~~~~la~~l~~~g~~vl~iD 34 (116)
T cd02034 2 IAITGKGGVGKTTIAALLARYLAEKGKPVLAID 34 (116)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 789889977499999999999997899699998