HHsearch alignment for GI: 254780218 and conserved domain: cd02035
>cd02035 ArsA ArsA ATPase functionas as an efflux pump located on the inner membrane of the cell. This ATP-driven oxyanion pump catalyzes the extrusion of arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents. The pump is composed of two subunits, the catalytic ArsA subunit and the membrane subunit ArsB, which are encoded by arsA and arsB genes respectively. Arsenic efflux in bacteria is catalyzed by either ArsB alone or by ArsAB complex. The ATP-coupled pump, however, is more efficient. ArsA is composed of two homologous halves, A1 and A2, connected by a short linker sequence.
Probab=94.53 E-value=0.073 Score=31.39 Aligned_cols=34 Identities=29% Similarity=0.303 Sum_probs=30.9
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 8998678887979999999999997798199987
Q gi|254780218|r 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39 (225)
Q Consensus 6 ~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~ 39 (225)
T Consensus 1 i~~~sGKGGVGKTTvAaalA~~lA~~G~rvLlvs 34 (217)
T cd02035 1 VIFFTGKGGVGKTTIAAATAVRLAEEGKKVLLVS 34 (217)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 9899789966199999999999996899499995