HHsearch alignment for GI: 254780218 and conserved domain: cd03230
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.31 E-value=0.02 Score=34.73 Aligned_cols=28 Identities=36% Similarity=0.544 Sum_probs=24.9
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 8886899867888797999999999999
Q gi|254780218|r 2 NSGLFISFEGIEGAGKTTHISLLKRFLQ 29 (225)
Q Consensus 2 ~~g~~I~iEGiDGsGKsTq~~~L~~~L~ 29 (225)
T Consensus 24 ~~Gei~gl~G~NGaGKSTLl~~i~Gl~~ 51 (173)
T cd03230 24 EKGEIYGLLGPNGAGKTTLIKIILGLLK 51 (173)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 7993999987899799999999976857