HHsearch alignment for GI: 254780218 and conserved domain: cd03255
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=95.79 E-value=0.0097 Score=36.61 Aligned_cols=30 Identities=27% Similarity=0.512 Sum_probs=25.5
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf 888689986788879799999999999977
Q gi|254780218|r 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRK 31 (225)
Q Consensus 2 ~~g~~I~iEGiDGsGKsTq~~~L~~~L~~~ 31 (225)
T Consensus 28 ~~Ge~~~iiG~sGsGKTTll~~i~Gl~~p~ 57 (218)
T cd03255 28 EKGEFVAIVGPSGSGKSTLLNILGGLDRPT 57 (218)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCCCCC
T ss_conf 699899999999986999999996699999