>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=95.14  E-value=0.027  Score=33.98  Aligned_cols=36  Identities=28%  Similarity=0.410  Sum_probs=28.3

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf             888689986788879799999999999977981999
Q gi|254780218|r    2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV   37 (225)
Q Consensus         2 ~~g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~   37 (225)
T Consensus        24 ~~Gei~gllG~NGaGKTTll~~i~Gl~~p~~G~i~i   59 (210)
T cd03269          24 EKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLF   59 (210)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
T ss_conf             799599999899984999999996002668998999