HHsearch alignment for GI: 254780218 and conserved domain: pfam00485
>pfam00485 PRK Phosphoribulokinase / Uridine kinase family. In Arabidopsis the region carries two binding domains, a phosphoribosylpyrophosphate-binding domain and, at the very C-terminus, a uracil-binding domain.
Probab=98.51 E-value=8.4e-07 Score=60.86 Aligned_cols=165 Identities=18% Similarity=0.144 Sum_probs=82.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE----CCCC---CCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8998678887979999999999997798199987----7889---84410011001244454101345677788999997
Q gi|254780218|r 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR----EPGG---TPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDH 78 (225)
Q Consensus 6 ~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~----eP~~---t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~ 78 (225)
T Consensus 1 iIgIaG~SgSGKTT~a~~L~~~l~~~~~~~~~~~~d~~~~~d~~~~~~~~~~~~~~~~~~~~~d~P~a~d-------~~l 73 (196)
T pfam00485 1 IIGVAGSSGAGKTTVARTFVSIFGREGVPAAGIEGDSFHRYDRFYMDLHMEDRKRAGNNHYSFFSPEAND-------FDL 73 (196)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHCCCCCHHHHHHCCCCCCCCCCCCCCC-------HHH
T ss_conf 9899899857199999999999660587764124317986041024437576765145788978966235-------999
Q ss_pred HHHHHHHHHCCCCEEEECCCCCCCEEHHCCCCCC---CHHHHHHHHHHHCCC--CCCCEEEEEEECHHHHHHHHHHHHHH
Q ss_conf 7635655423452587235424310001003444---245776544420388--98411566520348776443211111
Q gi|254780218|r 79 VENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---QHLFLDSLQEISVQE--VMPDCTIILDLPVDIGLKRVQNRYSL 153 (225)
Q Consensus 79 ~~~~I~p~L~~g~iVI~DRy~~S~lAYQ~~~~~~---~~~~i~~l~~~~~~~--~~PDl~i~Ldv~~e~a~~Ri~~R~~~ 153 (225)
T Consensus 74 l~~~l~-~Lk~g~~i~~P~Ydf~~~~r~~~~~~i~p~~viIvEGi~~l~~~~ir~l~D~kIfid~~~d~rl~RRi~RD~~ 152 (196)
T pfam00485 74 LYEQFK-ELKEGGSGDKPIYNHVTGEADPWPELIEGADILFIEGLHGLYDERVAQLLDLKIYVDPDIDLELIQKIQRDMA 152 (196)
T ss_pred HHHHHH-HHHCCCCEEEEEEECCCCCCCCCCEECCCCCEEEEECHHHCCCHHHHHHHCEEEEEECCCCHHHHHHHHHCHH
T ss_conf 999999-9708994576567513453367736617885699943333032778876384799726801999999873457
Q ss_pred HHCCHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 00000000211288999999999999999
Q gi|254780218|r 154 RESACLDYFERKDVMIHEKRRQIFLDIAR 182 (225)
Q Consensus 154 ~~~~~~d~~E~~~~~~~~kv~~~y~~la~ 182 (225)
T Consensus 153 eRgrs~~~v----~~q~~~v~p~~~~fI~ 177 (196)
T pfam00485 153 ERGHSLEGV----TDSIERRKPDYVNYIC 177 (196)
T ss_pred HHCCCHHHH----HHHHHHHHHHHHHHCC
T ss_conf 519999999----9999997253896474